Publications Ecological Modeling

Publications listed by year

An urban Blitz with a twist: rapid biodiversity assessment using aquatic environmental DNA

Kamil Hupało, Markus Majaneva, Molly Victoria Czachur, Lucas Sire, Daniel Marquina, Darío A. Lijtmaer, Vladislav Ivanov, Sonja Leidenberger, Fedor, Jr Čiampor, Zuzana Čiamporová-Zaťovičová, Izabela S. Mendes, Andrea Desiderato, Lasse Topstad, Kenny Meganck, Danial Hariz Z. A. et al.

Environmental DNA

2021. Article. https://doi.org/10.1002/edn3.152 Open Access

Robustness of life histories to environmental variability in complex versus simple life cycles

Annie Jonsson

Theoretical Ecology

2021. Article. https://doi.org/10.1007/s12080-021-00501-1 Open Access

Why are so many Northern European aquatic invertebrates missing in red-listing and how can we improve assessments for those?

Sonja Leidenberger, Iqram Muhammed, Sarah J. Bourlat

1st DNAQUA International Conference 2021

2021. Conference paper, oral presentation with abstract. Open Access

Inland blue holes of The Bahamas - chemistry and biology in a unique aquatic environment

Caroline Björnerås, Martin Škerlep, Raphael Gollnisch, Simon David Herzog, Gustaf Ekelund Ugge, Alexander Hegg, Nan Hu, Emma Johansson, Marcus Lee, Varpu Pärssinen, Yongcui Sha, Jerker Vinterstare, Huan Zhang, Kaj Hulthén, Christer Brönmark et al.

Fundamental and Applied Limnology

2020. Article. https://doi.org/10.1127/fal/2020/1330 Open Access

Transcriptional and biochemical biomarker responses in a freshwater mussel (Anodonta anatina) under environmentally relevant Cu exposure

Gustaf Magnus Oskar Ekelund Ugge, Annie Jonsson, Björn Olsson, Robert Sjöback, Olof Berglund

Environmental Science and Pollution Research

2020. Article. https://doi.org/10.1007/s11356-020-07660-4 Open Access

Halvvägs i INTERREG-projketet – BIstånd till Nordiska Bin – Rapport från Sverige

Sonja Leidenberger

NordBi-Aktuellt

2020. Article. Open Access

Data on three Baltic species of Corynosoma Lühe, 1905 (Acanthocephala: Polymorphidae) from Baltic grey (Halichoerus grypus) and ringed seals (Pusa hispida)

Sonja Leidenberger, Sven Boström, Matthew T. Wayland

2020. . https://doi.org/10.5061/dryad.np5hqbzq1

Host records and geographical distribution of Corynosoma magdaleni, C. semerme and C. strumosum (Acanthocephala: Polymorphidae)

Sonja Leidenberger, Sven Boström, Matthew Thomas Wayland

Biodiversity Data Journal

2020. Article. https://doi.org/10.3897/BDJ.8.e50500 Open Access

Getting Choosy About Whitefish in Lake Vättern: Using Participatory Approaches to Improve Fisheries Selectivity

Alfred Sandström, Johnny Norrgård, Thomas Axenrot, Malin Setzer, Tomas Jonsson

Collaborative Research in Fisheries

2020. Chapter in book. https://doi.org/10.1007/978-3-030-26784-1_4

Diel vertical migration of copepods and its environmental drivers in subtropical Bahamian blue holes

Yongcui Sha, Huan Zhang, Marcus Lee, Caroline Björnerås, Martin Škerlep, Raphael Gollnisch, Simon D. Herzog, Gustaf Magnus Oskar Ekelund Ugge, Jerker Vinterstare, Nan Hu, Varpu Pärssinen, Kaj Hulthén, P. Anders Nilsson, Karin Rengefors, Christer Brönmark et al.

Aquatic Ecology

2020. Article. https://doi.org/10.1007/s10452-020-09807-4 Open Access

Ecosystem function in predator-prey food webs: confronting dynamic models with empirical data

Alva Curtsdotter, H. Thomas Banks, John E. Banks, Mattias Jonsson, Tomas Jonsson, Amanda N. Laubmeier, Michael Traugott, Riccardo Bommarco

Journal of Animal Ecology

2019. Article. https://doi.org/10.1111/1365-2656.12892

Approximations of population growth in a noisy environment: on the dichotomy of non-age and age structure

Annie Jonsson, Uno Wennergren

Theoretical Ecology

2019. Article. https://doi.org/10.1007/s12080-018-0391-2 Open Access

Integrating experimental and distribution data to predict future species patterns

Jonne Kotta, Jarno Vanhatalo, Holger Jänes, Helen Orav-Kotta, Luca Rugiu, Veijo Jormalainen, Ivo Bobsien, Markku Viitasalo, Elina Virtanen, Antonia Nyström Sandman, Martin Isaeus, Sonja Leidenberger, Per R. Jonsson, Kerstin Johannesson

Scientific Reports

2019. Article. https://doi.org/10.1038/s41598-018-38416-3 Open Access

Nordiskt honungsbi studeras på Nordens ark

Sonja Leidenberger, Ann-Charlotte Berntsson, Mats Niklasson

Yrfän

2019. Article.

Diversitet hos hakmaskar – tarmparasiter hos gråsälar i Östersjön

Sonja Leidenberger, Sven Boström

Fauna och flora

2019. Article. Open Access

Morphological observations on three Baltic species of Corynosoma Lühe, 1905 (Acanthocephala, Polymorphidae)

Sonja Leidenberger, Sven Boström, Matthew T. Wayland

European journal of taxonomy

2019. Article. https://doi.org/10.5852/ejt.2019.514 Open Access

End biodiversity loss through improved tracking of marine threatened invertebrates

Sonja Leidenberger, Annie Jonsson, Sarah Bourlat

8th International Barcode of Life Conference 2019, June 17-20, 2019, Trondheim, Norway

2019. Conference paper, poster. Open Access

BIstånd till nordiska bin – en resurs för framtidens ekosystemtjänster

Sonja Leidenberger, Mats Niklasson, AnnCharlotte Berntsson

NordBi-Aktuellt

2019. Article. Open Access

Lägesrapport inom INTERREG-projektet: BIstånd till nordiska bin

Sonja Leidenberger, Niclas Norrström

NordBi-Aktuellt

2019. Article. Open Access

A potential role for rare species in ecosystem dynamics

Torbjörn Säterberg, Tomas Jonsson, Jon Yearsley, Sofia Berg, Bo Ebenman

Scientific Reports

2019. Article. https://doi.org/10.1038/s41598-019-47541-6 Open Access

Route optimization as an instrument to improve animal welfare and economics in pre-slaughter logistics

Mikael Frisk, Annie Jonsson, Stefan Sellman, Patrik Flisberg, Mikael Rönnqvist, Uno Wennergren

PLoS ONE

2018. Article. https://doi.org/10.1371/journal.pone.0193223 Open Access

Interim Report of the Working Group on Multispecies Assessment Methods (WGSAM)

Daniel Howell, Alexander Kempf, Andrea Belgrano, Robert Thorpe, Morten Vinther, Valerio Bartolino, John Pope, Alfonso Perez Rodriguez, Sarah Gaichas, Santiago Cerviño, Niclas Norrström, Michael Spence, Ching Villanueva, Nataliia Kulatska, Erla Sturludottir et al.

2018. Report. Open Access

Predictive power of food web models based on body size decreases with trophic complexity

Tomas Jonsson, Riikka Kaartinen, Mattias Jonsson, Riccardo Bommarco

Ecology Letters

2018. Article. https://doi.org/10.1111/ele.12938

High Redundancy as well as Complementary Prey Choice Characterize Generalist Predator Food Webs in Agroecosystems

Eve Roubinet, Tomas Jonsson, Gerard Malsher, Karin Staudacher, Michael Traugott, Barbara Ekbom, Mattias Jonsson

Scientific Reports

2018. Article. https://doi.org/10.1038/s41598-018-26191-0 Open Access

Synthetic generation of spatial graphs

Vicenç Torra, Annie Jonsson, Guillermo Navarro‐Arribas, Julián Salas

International Journal of Intelligent Systems

2018. Article. https://doi.org/10.1002/int.22034 Open Access

Parameter estimation for an allometric food web model

H. T. Banks, J. E. Banks, Riccardo Bommarco, Alva Curtsdotter, Tomas Jonsson, A. N. Laubmeier

International journal of pure and applied mathematics

2017. Article. https://doi.org/10.12732/ijpam.v114i1.12 Open Access

Report of the Working Group on Multispecies Assessment Methods (WGSAM), 10-14 October 2016, Reykjavik, Iceland

Daniel Howell, Alexander Kempf, Barbara Bauer, Andrea Belgrano, Robert Thorpe, Morten Vinther, Valerio Bartolino, John Pope, Sigrid Lehuta, Sarah Gaichas, Sean Lucey, Niclas Norrström, Michael Spence, Noél Holmgren, Ching Villanueva et al.

2017. Report. Open Access

Conditions for Eltonian Pyramids in Lotka-Volterra Food Chains

Tomas Jonsson

Scientific Reports

2017. Article. https://doi.org/10.1038/s41598-017-11204-1 Open Access

Metabolic theory predicts animal self-thinning

Tomas Jonsson

Journal of Animal Ecology

2017. Article. https://doi.org/10.1111/1365-2656.12638

Vetenskaplig utvärdering av åtgärdseffekter mot almsjukan inom projektet LifeELMIAS: Rapport till Naturvårdsverket 2017-10-31

Annie Jonsson

2017. Report.

Rare but Important: Perturbations to Uncommon Species Can Have a Large Impact on the Structure of Ecological Communities

Tomas Jonsson, Sofia Berg, Torbjörn Säterberg, Céline Hauzy, Bo Ebenman

Adaptive Food Webs: Stability and Transitions of Real and Model Ecosystems

2017. Chapter in book. https://doi.org/10.1017/9781316871867.021

Utvärdering av Hornborgasjöns restaurering: måluppfyllelse och effekter på biologisk mångfald med fokus på vegetation och fågelfauna

Annie Jonsson, Tomas Jonsson, Per Toräng

2017. Report. Open Access

Nash equilibrium can resolve conflicting maximum sustainable yields in multi-species fisheries management

Niclas Norrström, Michele Casini, Noél M. A. Holmgren

ICES Journal of Marine Science

2017. Article. https://doi.org/10.1093/icesjms/fsw148 Open Access

Report of the Baltic Fisheries Assessment Working Group (WGBFAS): 19-26 April 2017, Copenhagen, Denmark

Alessandro Orio, Anders Nielsen, Anna Luzenczyk, Casper Berg, Didzis Ustups, Dmitriy Artemenkov, Franziska Schade, Georgs Kornilovs, Henrik Degel, Harry Strehlow, Igor Karpushevskiy, Jan Horbowy, Jari Raitaniemi, Jesper Boje, Joakim Hjelm et al.

2017. Report. Open Access

Evolution of the selfing syndrome: Anther orientation and herkogamy together determine reproductive assurance in a self-compatible plant

Per Toräng, Linus Vikström, Jörg Wunder, Stefan Wötzel, George Coupland, Jon Ågren

Evolution

2017. Article. https://doi.org/10.1111/evo.13308

Interim Report of the ICES/HELCOM Working Group on Integrated Assessments of the Baltic Sea (WGIAB): 18-22 April 2016 Helsinki, Finland

Lena Bergström, Thorsten Blenckner, Romain Frelat, Anders Grimvall, Päivi Haapasaari, Bianca Haas, Outi Heikinheimo, Susanna Jernberg, Scott Large, Martin Lindegren, Phil Levin, Annukka Lehikoinen, Christian Möllmann, Marie Nordström, Niclas Norrström et al.

2016. Report.

Report of the Workshop on DEveloping Integrated AdviCE for Baltic Sea ecosystem-based fisheries management (WKDEICE): 18-21 April 2016 Helsinki, Finland

Hans-Harald Hinrichsen, Scott Large, Christian Möllmann, Bärbel Müller-Karulis, Stefan Neuenfeldt, Niclas Norrström, Jörn Schmidt, Camilla Sguotti, Maciej Tomczak, Rudi Voss, Henrik Hamrén

2016. Report.

Report of the Working Group on Multispecies Assessment Methods (WGSAM), 9–13 November 2015, Woods Hole, USA

Daniel Howell, Steve Mackinson, Alexander Kempf, Anna Rindorf, Andrea Belgrano, Robert Thorpe, Morten Vinther, Valerio Bartolino, John Pope, Alfonso Perez Rodriguez, Clement Garcia, Sigrid Lehuta, Isaac Kaplan, Sarah Gaichas, Curti Kiersten et al.

2016. Report. Open Access

Improvement of animal welfare by strategic analysis and logistic optimisation of animal slaughter transportation

Nina Håkansson, P. Flisberg, B. Algers, Annie Jonsson, M. Rönnqvist, U. Wennergren

Animal Welfare

2016. Article. https://doi.org/10.7120/09627286.25.2.255

Ökad biologisk mångfald och renare vatten med livskraftiga stormusselbestånd i Göta älvs vattensystem: Dagens situation och åtgärder för att minska vattenkraftens negativa påverkan

Annie Jonsson, Ann Bertilsson

2016. Report.

Defining the reference situation for biodiversity in Life Cycle Assessments: Review and recommendations

Emke Vrasdonk, Ulrika Palme, Tommy Lennartsson, Alexandre Antonelli, Sofia Berg, Annie Jonsson, Christel Cederberg

10th International Conference on Life Cycle Assessment of Food, Dublin, 19-21 October 2016

2016. Conference paper.

Report of the Benchmark Workshop on Baltic Cod Stocks (WKBALTCOD)

Gustaf Almqvist, Michael Andersen, Casper Willestofte Berg, Wendy Broadgate, Meaghan Bryan, Steven Campana, Max Cardinale, Michele Casini, Jan Dierking, Christian von Dorrien, Margit Eero, Yuri Efimov, Pavel Gasyukov, Jakob Hemmer-Hansen, Joakim Hjelm et al.

2015. Report. Open Access

Ecological communities are vulnerable to realistic extinction sequences

Sofia Berg, Aexander Pimenov, Catherine Palmer, Mark Emmerson, Tomas Jonsson

Oikos

2015. Article. https://doi.org/10.1111/oik.01279

Report of the Baltic Fisheries Assessment Working Group (WGBFAS): 14-21 April 2015, ICES HQ, Copenhagen, Denmark

Mikaela Bergenius, Jesper Boje, Michele Casini, Henrik Degel, Margit Eero, Ann-Britt Florin, Pavel Gasyukov, Wlodzimierz Grygiel, Tomas Gröhsler, Joakim Hjelm, Jan Horbowy, Noél Holmgren, Niclas Norrström, Olavi Kaljuste, Igor Karpushevskiy et al.

2015. Report. Open Access

Report of the ICES/HELCOM Working Group on Integrated Assessments of the Baltic Sea (WGIAB)

Lena Bergström, Thorsten Blenckner, Anders Grimvall, Anna Gårdmark, Henrik Hamrén, Noél Holmgren, Ute Jacob, Stuart Kininmonth, Scott Large, Phil Levin, Annukka Lehikoinen, Marcos Llope, Anna Luzenczyk, Bärbel Müller-Karulis, Christian Möllmann et al.

2015. Report. Open Access

Eastern Baltic cod in distress: biological changes and challenges for stock assessment

Margit Eero, Joakim Hjelm, Jane Behrens, Kurt Buchmann, Massimiliano Cardinale, Michele Casini, Pavel Gasyukov, Noél Holmgren, Jan Horbowy, Karin Hüssy, Eskil Kirkegaard, Georgs Kornilovs, Uwe Krumme, Friedrich W. Köster, Rainer Oeberst et al.

ICES Journal of Marine Science

2015. Article. https://doi.org/10.1093/icesjms/fsv109 Open Access

The context dependency of species keystone status during food web disassembly

Tomas Jonsson, Sofia Berg, Mark Emmerson, Alexander Pimenov

Food Webs

2015. Article. https://doi.org/10.1016/j.fooweb.2015.07.002

The reliability of R50 as a measure of vulnerability of food webs to sequential species deletions

Tomas Jonsson, Sofia Berg, Alexander Pimenov, Catherine Palmer, Mark Emmerson

Oikos

2015. Article. https://doi.org/10.1111/oik.01588

A freshwater predator hit twice by effects of warming across trophic levels

Tomas Jonsson, Malin Setzer

Nature Communications

2015. Article. https://doi.org/10.1038/ncomms6992 Open Access

Report of the Baltic Fisheries Assessment Working Group (WGBFAS), 3-10 April 2014, ICES HQ, Copenhagen, Denmark

Marie Storr-Paulsen, Albert Anu, Timo Arula, Jesper Boje, Michele Casini, Henrik Degel, Margit Eero, Pavel Gasyukov, Tomas Gröhsler, Joakim Hjelm, Jan Horbowy, Noél Holmgren, Stanislovas Jonusas, Olavi Kaljuste, Anastasiia Karpushevskaia et al.

2014. Report. Open Access

Predation av fisk och signalkräfta på rödingrom - resultat från en fältstudie i Vättern

Per Nyberg, Erik Degerman, Malin Setzer, Johnny Norrgård, Tomas Jonsson

2012. Report.

The Role of Body Size in Complex Food Webs: A Cold Case

Ute Jacob, Aaron Thierry, Ulrich Brose, Wofe E. Arntz, Sofia Berg, Thomas Brey, Ingo Fetzer, Tomas Jonsson, Katja Mintenbeck, Christian Möllmann, Owen Petchey, Jens O. Riede, Jennifer A. Dunne

Advances in Ecological Research

2011. Article. https://doi.org/10.1016/B978-0-12-386475-8.00005-8

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