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      University of Skövde, link to startpage

      Jane Synnergren

      Professor of BioInformatics
      School of Bioscience
      Room G2262

      I am Professor in bioinformatics at the University of Skövde, Sweden, and Head of the Translational Bioinformatics research group  consisting of a group of 19 researchers with a dedicated interest in bioinformatics. I have a background in Data Science and received my MSc in Computer Sciences from the University of Skövde in 2003.  During my graduate studies I developed my expertise in bioinformatics and large-scale omics data analysis and received my PhD from the University of Gothenburg in 2010.

      My research is focused on analysis methods for identification of biomarkers and integration of multiple types of omics data. I am PI for several research projects specialized in stem cell differentiation, toxicity testing and disease modeling using stem cell based in vitro systems. I am also leading projects particularly focused on advanced analysis of big data, biomarker identification, and data integration with particular interest in machine-learning methods.

      Working in close collaboration with the stem cell industry and the pharmaceutical industry we perform global expression studies including transcriptomics, proteomics, epigenomics, and metabolomics of human pluripotent stem cells during their differentiation towards functional cell types. The results from these studies have revealed mechanistic highlights during the early phases of stem cell differentiation and identified biomarkers with potential importance for applications in toxicity testing, drug development, and disease modeling.

      https://www.researchgate.net/profile/Jane_Synnergren

      Research

      2021

      Benjamin Ulfenborg, Alexander Karlsson, Maria Riveiro, Christian X. Andersson, Peter Sartipy, Jane Synnergren

      Journal of Biotechnology

      2021. Article. https://doi.org/10.1016/j.jbiotec.2020.12.002 Open Access

      2020

      Louise Delsing, Anna Herland, Anna Falk, Ryan Hicks, Jane Synnergren, Henrik Zetterberg

      Molecular and Cellular Neuroscience

      2020. Article. https://doi.org/10.1016/j.mcn.2020.103533 Open Access

      Nidal Ghosheh, Barbara Küppers-Munther, Annika Asplund, Christian X. Andersson, Petter Björquist, Tommy B. Andersson, Helena Carén, Stina Simonsson, Peter Sartipy, Jane Synnergren

      ACS Omega

      2020. Article. https://doi.org/10.1021/acsomega.9b03514 Open Access

      Gustav Holmgren, Benjamin Ulfenborg, Annika Asplund, Karin Toet, Christian X. Andersson, Ann Hammarstedt, Roeland Hanemaaijer, Barbara Küppers-Munther, Jane Synnergren

      International Journal of Molecular Sciences

      2020. Article. https://doi.org/10.3390/ijms21020469 Open Access

      Markus Johansson, Benjamin Ulfenborg, Christian X. Andersson, Sepideh Heydarkhan-Hagvall, Anders Jeppsson, Peter Sartipy, Jane Synnergren

      Biology open

      2020. Article. https://doi.org/10.1242/bio.052381 Open Access

      Jane Synnergren, Kristina Vukusic, Pierre Dönnes, Marianne Jonsson, Anders Lindahl, Göran Dellgren, Anders Jeppsson, Julia Asp

      Physiological Genomics

      2020. Article. https://doi.org/10.1152/physiolgenomics.00036.2019

      2019

      Louise Delsing, Therese Kallur, Henrik Zetterberg, Ryan Hicks, Jane Synnergren

      Fluids and Barriers of the CNS

      2019. Article. https://doi.org/10.1186/s12987-019-0147-4 Open Access

      2018

      Louise Delsing, Pierre Dönnes, José Sánchez, Maryam Clausen, Dmitrios Voulgaris, Anna Falk, Anna Herland, Gabriella Brolén, Henrik Zetterberg, Ryan Hicks, Jane Synnergren

      Stem Cells

      2018. Article. https://doi.org/10.1002/stem.2908 Open Access

      Gustav Holmgren, Peter Sartipy, Christian X. Andersson, Anders Lindahl, Jane Synnergren

      Toxicological Sciences

      2018. Article. https://doi.org/10.1093/toxsci/kfy012

      April 2017 - March 2020 Systems Biology
      October 2015 - September 2019 Systems Biology
      July 2013 - June 2016 Systems Biology
      October 2017 - May 2022 Systems Biology
      March 2017 - February 2021 Systems Biology
      October 2015 - September 2018 Systems Biology
      April 2019 - September 2021 Systems Biology
      October 2017 - May 2022 Systems Biology
      October 2017 - May 2022 Systems Biology
      October 2020 - September 2024 Systems Biology
      October 2015 - September 2019 Informatics
      Published: 1/9/2020
      Edited: 1/9/2020
      Responsible: webmaster@his.se