Publikationer Systembiologi - Högskolan i Skövde

Systembiologi

Novel glycovariant biomarkers of CA125 and CA15-3 and their diagnostic performance across histotypes of ovarian cancer: A multi-cohort study in Sweden and Finland

Hanna Roos Alexander, Shruti Jain, Kamlesh Gidwani, Benjamin Ulfenborg, Ulrika Ottander, Eva Lundin, Johanna Hynninen, Shamima Afrin Ruma, Kaisa Huhtinen, Karin Sundfeldt, Kim Pettersson, Annika Idahl

European Journal of Obstetrics, Gynecology, and Reproductive Biology

2025. Artikel. https://doi.org/10.1016/j.ejogrb.2025.114525 Open Access

A consensus taxonomy of altered (nonordinary) states of consciousness: Bringing order to disarray

Etzel Cardeña, Aviva Berkovich-Ohana, Katja Valli, Pablo Barttfeld, Alex Gomez-Marin, Bruce Greyson, V. K. Kumar, Steven Laureys, Tanya Marie Luhrmann, Andrew Newberg, Katrin H. Preller, Frank W. Putnam, Enzo Tagliazucchi, Roger Walsh, Olivia Carter et al.

Psychology of Consciousness

2025. Artikel. https://doi.org/10.1037/cns0000431 Open Access

Antisense-mediated regulation of exon usage in the elastic spring region of Titin modulates sarcomere function

Selvi Celik, Ludvig Hyrefelt, Tomasz Czuba, Yuan Li, Juliana Assis, Julia Martinez, Markus Johansson, Oscar André, Jane Synnergren, Joakim Sandstedt, Pontus Nordenfelt, Kristina Vukusic, J. Gustav Smith, Olof Gidlöf

Cardiovascular Research

2025. Artikel. https://doi.org/10.1093/cvr/cvaf037 Open Access

After a Hand Was Lent: Sporadically Experiencing Multisensory Interference During the Rubber Hand Illusion Does Not Shield Against Disembodiment

Julia Eck, David Dignath, Andreas Kalckert, Roland Pfister

Journal of Cognition

2025. Artikel. https://doi.org/10.5334/joc.427 Open Access

Defined culture conditions robustly maintain human stem cell pluripotency, highlighting a role for Ca²⁺ signaling

Ilse Eidhof, Benjamin Ulfenborg, Malin Kele, Mansoureh Shahsavani, Dania Winn, Per Uhlén, Anna Falk

Communications Biology

2025. Artikel. https://doi.org/10.1038/s42003-025-07658-z Open Access

Dmitri Filimonov, Saana Lenkkeri, Mika Koivisto, Antti Revonsuo

NeuroImage

2025. Artikel. https://doi.org/10.1016/j.neuroimage.2025.121168 Open Access

Återskapa och stärka biologisk mångfald inom luftledningsgator på Kinnekulle: från landsskapsanalys till skötselplan

Annie Jonsson, Sofia Berg

2025. Rapport.

Meditation and psychedelics facilitate similar types of mystical, psychological, and philosophical-existential insights predictive of wellbeing: a qualitative-quantitative approach

Jussi Jylkkä, Hilla Väyrynen, Enyu Lin, Catharina Walldén, Andreas Krabbe, Juuso Kähönen, Pilleriin Sikka

Consciousness and Cognition

2025. Artikel. https://doi.org/10.1016/j.concog.2025.103901 Open Access

Freshwater mollusc community screening - Classical and eDNA monitoring methods to detect rare, indicator and invasive species

Sonja Leidenberger, Vollrath Wiese, Finja Schaumann, Felix Pleiss, Kathrin Langen, Sarah J. Bourlat

Science of the Total Environment

2025. Artikel. https://doi.org/10.1016/j.scitotenv.2024.177763 Open Access

Predictive role of exteroceptive and interoceptive bodily dimensions to schizotypal personality traits

M. R. Pasciucco, M. G. Perrucci, P. Croce, Andreas Kalckert, M. Costantini, F. Ferri

Scientific Reports

2025. Artikel. https://doi.org/10.1038/s41598-025-89951-9 Open Access

Advice on how to start beekeeping, memories with bees and the uses of honey: results of an online questionnaire with European beekeepers

Samuel Perichon, Leonora Adamchuk, Lejla Biber, Janko Božič, Róbert Chlebo, Janja Filipi, Sonja Leidenberger, Georgios Mavrofridis, Erkay Özgör, Cristina Bianca Pocol, Marco Porporato, María Shantal Rodríguez-Flores, Miguel Vilas-Boas, Aleksejs Zacepins

Journal of Apicultural Research

2025. Artikel. https://doi.org/10.1080/00218839.2024.2361965

Basil Hiley (1935 - 2025): Obituary

Paavo Pylkkänen

Journal of consciousness studies

2025. Artikel. https://doi.org/10.53765/20512201.32.5.194

Consciousness, Reduction and Quantum Psychophysical Laws

Paavo Pylkkänen

The Elephant in the Room: Investigating Consciousness Beyond Reductionism

2025. Kapitel i bok.

Real Consciousness in a Real World: Interactionist Monism

Paavo Pylkkänen

Journal of consciousness studies

2025. Artikel. https://doi.org/10.53765/20512201.32.5.062

Was David Bohm a Wave Function Realist?

Paavo Pylkkänen

Journal of Physics, Conference Series

2025. Artikel. https://doi.org/10.1088/1742-6596/2948/1/012013 Open Access

Consciousness and the Measurement Problem in Quantum Mechanics

Paavo Pylkkänen, Gustaf Malmberg

Journal of Physics, Conference Series

2025. Artikel. https://doi.org/10.1088/1742-6596/3017/1/012052 Open Access

State anxiety is associated with hormonal, cardiovascular, and sleep parameters in Finnish postmenopausal women

Ville Rimpilä, Tero Vahlberg, Katja Valli, Tarja Saaresranta

Maturitas

2025. Artikel. https://doi.org/10.1016/j.maturitas.2025.108266 Open Access

MUC5B modulation of early oral biofilm glucose metabolism

Carolina Robertsson, Julia Davies, Gunnel Svensäter, Anders Bay Nord, Niclas Norrström, Claes Wickström

Frontiers in Oral Health

2025. Artikel. https://doi.org/10.3389/froh.2025.1516025 Open Access

Maternal Adiponectin Decreases Placenta Nutrient Transport in Mice

Manisha Samad, Benjamin Ulfenborg, Sahar Soleimani Sani, Marco Bauzá Thorbrügge, Man Mohan Shrestha, Claes Ohlsson, Manuel Maliqueo, Elisabet Stener‐Victorin, Ingrid Wernstedt Asterholm, Anna Benrick

The FASEB Journal

2025. Artikel. https://doi.org/10.1096/fj.202403251rr Open Access

The CGA1-SNAT regulatory module potentially contributes to cytokinin-mediated melatonin biosynthesis and drought tolerance in wheat

Roohollah Shamloo-Dashtpagerdi, Angelica Lindlöf, Massume Aliakbari

BMC Plant Biology

2025. Artikel. https://doi.org/10.1186/s12870-025-06313-3 Open Access

Machine Learning for Predicting Cancer Endpoints from Bulk Omics Data: Generalizing Knowledge from Various Modalities Across Domains

Sören Richard Stahlschmidt

2025. Doktorsavhandling.

Physics and Reality: International Conference on Philosophy of Physics 04/06/2024 - 06/06/2024 Helsinki, Finland

Avril Styrman, Paavo Pylkkänen, Saara Wuokko

2025. Redaktörskap (proceedings). Open Access

The relationship of bispectral index values to conscious state: an analysis of two volunteer cohort studies

Jordan J. Wehrman, Peter J. Schuller, Cameron P. Casey, Annalotta Scheinin, Roosa E. Kallionpää, Katja Valli, Antti Revonsuo, Oskari Kantonen, Sean Tanabe, William Filbey, Robert A. Pearce, Jamie W. Sleigh, Harry Scheinin, Robert D. Sanders

British Journal of Anaesthesia

2025. Artikel. https://doi.org/10.1016/j.bja.2024.09.032

A dream EEG and mentation database

William Wong, Rubén Herzog, Kátia Cristine Andrade, Thomas Andrillon, Draulio Barros de Araujo, Isabelle Arnulf, Somayeh Ataei, Giulia Avvenuti, Benjamin Baird, Michele Bellesi, Damiana Bergamo, Giulio Bernardi, Mark Blagrove, Nicolas Decat, Çağatay Demirel et al.

Nature Communications

2025. Artikel. https://doi.org/10.1038/s41467-025-61945-1 Open Access

Metabolomics for early pancreatic cancer detection in plasma samples from a Swedish prospective population-based biobank

Emmy Borgmästars, Sara Jacobson, Maja Simm, Mattias Johansson, Ola Billing, Christina Lundin, Hanna Nyström, Daniel Öhlund, Zelmina Lubovac-Pilav, Pär Jonsson, Oskar Franklin, Malin Sund

Journal of Gastrointestinal Oncology

2024. Artikel. https://doi.org/10.21037/jgo-23-930 Open Access

Multi-omics profiling to identify early plasma biomarkers in pre-diagnostic pancreatic ductal adenocarcinoma: a nested case-control study

Emmy Borgmästars, Benjamin Ulfenborg, Mattias Johansson, Pär Jonsson, Ola Billing, Oskar Franklin, Christina Lundin, Sara Jacobson, Maja Simm, Zelmina Lubovac-Pilav, Malin Sund

Translational Oncology

2024. Artikel. https://doi.org/10.1016/j.tranon.2024.102059 Open Access

True Colors, Time after Time: Essays Honoring Valtteri Arstila

Alexander D. Carruth, Heidi Haanila, Paavo Pylkkänen, Pii Telakivi

2024. Redaktörskap (samlingsverk). Open Access

Quantum Properties as Potentialities in Bohm’s 1951 Book Quantum Theory

Alexander D. Carruth, Paavo Pylkkänen

True Colors, Time After Time: Essays Honoring Valtteri Arstila

2024. Kapitel i bok. Open Access

Enhancing Maturation and Translatability of Human Pluripotent Stem Cell-Derived Cardiomyocytes through a Novel Medium Containing Acetyl-CoA Carboxylase 2 Inhibitor

Cláudia Correia, Jonas Christoffersson, Sandra Tejedor, Saïd El-Haou, Meztli Matadamas-Guzman, Syam Nair, Pierre Dönnes, Gentian Musa, Mattias Rohman, Monika Sundqvist, Rebecca B. Riddle, Bramasta Nugraha, Ioritz Sorzabal Bellido, Markus Johansson, Qing-Dong Wang et al.

Cells

2024. Artikel. https://doi.org/10.3390/cells13161339 Open Access

Latent space arithmetic on data embeddings from healthy multi-tissue human RNA-seq decodes disease modules

Hendrik A. de Weerd, Dimitri Guala, Mika Gustafsson, Jane Synnergren, Jesper Tegnér, Zelmina Lubovac-Pilav, Rasmus Magnusson

Patterns

2024. Artikel. https://doi.org/10.1016/j.patter.2024.101093 Open Access

An Assessment of the Degradation Potential and Genomic Insights Towards Hydroxylated Biphenyls by Rhodococcus opacus Strain KT112-7

Darya Egorova, Björn Olsson, Tatyana Kir'yanova, Elena Plotnikova

Current Genomics

2024. Artikel. https://doi.org/10.2174/0113892029319746240812051356

Hur kan vi skapa utrymme för högskolepedagogiskt utvecklingsarbete?: Rapport från rundabordssamtal på NU2024-konferensen, Umeå

Irene Eriksson, Annie Jonsson, Kajsa Nalin, Linda Handlin

2024. Rapport.

The influence of feature-based attention and response requirements on ERP correlates of auditory awareness

Dmitri Filimonov, Andreas Krabbe, Antti Revonsuo, Mika Koivisto

Neuroscience of Consciousness

2024. Artikel. https://doi.org/10.1093/nc/niae031 Open Access

Is auditory awareness graded or dichotomous: Electrophysiological correlates of consciousness at different depths of stimulus processing

Dmitri Filimonov, Sampo Tanskanen, Antti Revonsuo, Mika Koivisto

Consciousness and Cognition

2024. Artikel. https://doi.org/10.1016/j.concog.2024.103720 Open Access

Head-to-head comparison of relevant cell sources of small extracellular vesicles for cardiac repair: Superiority of embryonic stem cells

Hernán González-King, Patricia G. Rodrigues, Tamsin Albery, Benyapa Tangruksa, Ramya Gurrapu, Andreia M. Silva, Gentian Musa, Dominika Kardasz, Kai Liu, Bengt Kull, Karin Åvall, Katarina Rydén-Markinhuhta, Tania Incitti, Nitin Sharma, Cecilia Graneli et al.

Journal of Extracellular Vesicles

2024. Artikel. https://doi.org/10.1002/jev2.12445 Open Access

Conceptualization for intended action: A dynamic model

Mauri Kaipainen, Antti Hautamäki, Joel Parthemore

Philosophical Psychology

2024. Artikel. https://doi.org/10.1080/09515089.2022.2164263 Open Access

Acceptance as a possible link between past psychedelic experiences and psychological flexibility

Andreas Krabbe, Pilleriin Sikka, Jussi Jylkkä

Scientific Reports

2024. Artikel. https://doi.org/10.1038/s41598-024-75595-8 Open Access

Proteome of Personalized Tissue-Engineered Veins

Susanna Larsson, Sandra Holmgren, Lachmi Jenndahl, Benjamin Ulfenborg, Raimund Strehl, Jane Synnergren, Nidal Ghosheh

ACS Omega

2024. Artikel. https://doi.org/10.1021/acsomega.3c07098 Open Access

Genomic alterations in ovarian endometriosis and subsequently diagnosed ovarian carcinoma

A. Linder, S. Westbom-Fremer, C. Mateoiu, A. Olsson Widjaja, T. Österlund, S. Veerla, A. Ståhlberg, Benjamin Ulfenborg, I. Hedenfalk, K. Sundfeldt

Human Reproduction

2024. Artikel. https://doi.org/10.1093/humrep/deae043 Open Access

Viral simulations in dreams: The effect of the COVID-19 pandemic on threatening dream content in a Finnish sample of diary dreams

Ville Loukola, Jarno Tuominen, Santeri Kirsilä, Annimaaria Kyyhkynen, Maron Lahdenperä, Lilja Parkkali, Emilia Ranta, Eveliina Malinen, Sanni Vanhanen, Katariina Välimaa, Henri Olkoniemi, Antti Revonsuo, Katja Valli

Consciousness and Cognition

2024. Artikel. https://doi.org/10.1016/j.concog.2024.103651 Open Access

Application of Metabolic Theory in Models for Growth of Individuals and Populations

Karl Mauritsson

2024. Doktorsavhandling. https://doi.org/10.3384/9789180757379 Open Access

A new mechanistic model for individual growth applied to insects under ad libitum conditions

Karl Mauritsson, Tomas Jonsson

PLOS ONE

2024. Artikel. https://doi.org/10.1371/journal.pone.0309664 Open Access

A new mechanistic model for individual growth suggests upregulated maintenance costs when food is scarce in an insect

Karl Mauritsson, Tomas Jonsson

Ecological Modelling

2024. Artikel. https://doi.org/10.1016/j.ecolmodel.2024.110703 Open Access

Multiple Realizability and Disjunction for the Special Sciences

Roque Molina Marchese

Organon F

2024. Artikel. https://doi.org/10.31577/orgf.2024.31303 Open Access

Vårt inhemska honungsbi

Mats Niklasson, Emil Svensson, Sonja Leidenberger, Niclas Norrström, Elizabeth Crawford

Bitidningen

2024. Artikel.

Nightmares share genetic risk factors with sleep and psychiatric traits

Hanna M. Ollila, Nasa Sinnott-Armstrong, Katri Kantojärvi, Martin Broberg, Teemu Palviainen, Samuel Jones, Vili Ripatti, Anita Pandit, Robin Rong, Kati Kristiansson, Nils Sandman, Katja Valli, Christer Hublin, Samuli Ripatti, Elisabeth Widen et al.

Translational Psychiatry

2024. Artikel. https://doi.org/10.1038/s41398-023-02637-6 Open Access

Extracellular vesicles transport RNA between cells: Unraveling their dual role in diagnostics and therapeutics

Zahra Payandeh, Benyapa Tangruksa, Jane Synnergren, Sepideh Heydarkhan-Hagvall, Joel Z. Nordin, Samir EL. Andaloussi, Jan Borén, John Wiseman, Mohammad Bohlooly-Y, Lennart Lindfors, Hadi Valadi

Molecular Aspects of Medicine

2024. Artikel, forskningsöversikt. https://doi.org/10.1016/j.mam.2024.101302 Open Access

Perception of threats to bee colonies and the future of local beekeeping by beekeepers in various European countries: [Perception des menaces pour les colonies d’abeilles et futur de l’apiculture locale envisagé par des apiculteurs dans différents pays d’Europe]

Samuel Perichon, Leonora Adamchuk, Lejla Biber, Janko Bozic, Robert Chlebo, Janja Filipi, Sonja Leidenberger, Georgios Mavrofridis, Erkay Ozgor, Cristina Pocol, Marco Porporato, Maria Shantal Rodriquez-Flores, Miguel Vilas-Boas, Aleksejs Zacepins

Bulletin de la Société Géographique de Liège

2024. Artikel. https://doi.org/10.25518/0770-7576.7229 Open Access

Alexithymia profiles and depression, anxiety, and stress

David A. Preece, Ashish Mehta, Kate Petrova, Pilleriin Sikka, Ethan Pemberton, James J. Gross

Journal of Affective Disorders

2024. Artikel. https://doi.org/10.1016/j.jad.2024.02.071 Open Access

Alexithymia or general psychological distress?: Discriminant validity of the Toronto Alexithymia Scale and the Perth Alexithymia Questionnaire

David A. Preece, Kate Petrova, Ashish Mehta, Pilleriin Sikka, James J. Gross

Journal of Affective Disorders

2024. Artikel. https://doi.org/10.1016/j.jad.2024.01.271 Open Access

Morning tiredness and insomnia symptoms are associated with increased blood pressure in midlife women

Ville Rimpilä, Katja Valli, Tero Vahlberg, Tarja Saaresranta

Maturitas

2024. Artikel. https://doi.org/10.1016/j.maturitas.2024.108131 Open Access

Collaborative research enhances selectivity in a lake fishery

Alfred Sandström, Johnny Norrgård, Thomas Axenrot, Henrik Ragnarsson-Stabo, Malin Setzer, Tomas Jonsson

Fisheries Management and Ecology

2024. Artikel. https://doi.org/10.1111/fme.12723 Open Access

Ecological comparison of native (Apis mellifera mellifera) and hybrid (Buckfast) honeybee drones in southwestern Sweden indicates local adaptation

Finja Schaumann, Niclas Norrström, Mats Niklasson, Sonja Leidenberger

PLOS ONE

2024. Artikel. https://doi.org/10.1371/journal.pone.0308831 Open Access

COVID-19 on mind: Daily worry about the coronavirus is linked to negative affect experienced during mind-wandering and dreaming

Pilleriin Sikka, Jarno Tuominen, Alejandro Ezquerro Nassar, Manuela Kirberg, Ville Loukola, Antti Revonsuo, Katja Valli, Jennifer Windt, Tristan A. Bekinschtein, Valdas Noreika

Emotion

2024. Artikel. https://doi.org/10.1037/emo0001255 Open Access

Domain Generalization of Deep Learning Models Under Subgroup Shift in Breast Cancer Prognosis

Sören Richard Stahlschmidt, Benjamin Ulfenborg, Göran Falkman, Jane Synnergren

2024 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB)

2024. Konferensbidrag. https://doi.org/10.1109/CIBCB58642.2024.10702166

Virtual Reality Full-Body Ownership Illusions: A Study on the Role of Perspective

Kristina Stenström, Maria Pyasik, Andreas Kalckert

Proceedings of the 19th SweCog Conference

2024. Konferensbidrag, poster. Open Access

The role of objective sleep in implicit and explicit affect regulation: A comprehensive review

Laura D. Straus, Maia ten Brink, Pilleriin Sikka, Radhika Srivastava, James J. Gross, Peter J. Colvonen

Neurobiology of Stress

2024. Artikel, forskningsöversikt. https://doi.org/10.1016/j.ynstr.2024.100655 Open Access

The Combination of Vascular Endothelial Growth Factor A (VEGF-A) and Fibroblast Growth Factor 1 (FGF1) Modified mRNA Improves Wound Healing in Diabetic Mice: An Ex Vivo and In Vivo Investigation

Sandra Tejedor, Maria Wågberg, Cláudia Correia, Karin Åvall, Mikko Hölttä, Leif Hultin, Michael Lerche, Nigel Davies, Nils Bergenhem, Arjan Snijder, Tom Marlow, Pierre Dönnes, Regina Fritsche-Danielson, Jane Synnergren, Karin Jennbacken et al.

Cells

2024. Artikel. https://doi.org/10.3390/cells13050414 Open Access

The rubber hand illusion questionnaire: An exploratory graph analysis of ownership, referral of touch, and control statements

Giorgia Tosi, Andreas Kalckert, Anantha Krishna Sivasubramanian, Daniele Romano

Attention, Perception & Psychophysics

2024. Artikel. https://doi.org/10.3758/s13414-024-02964-w Open Access

Examination av stora studentgrupper – möjligheter och utmaningar: projektrapport

Ulf Wilhelmsson, Ulrica Bohné, Jenny Lennartsson

2024. Rapport.

Dream function and dream amnesia: Dissolution of an apparent paradox

Jialin Zhao, Sarah F. Schoch, Katja Valli, Martin Dresler

Neuroscience and Biobehavioral Reviews

2024. Artikel. https://doi.org/10.1016/j.neubiorev.2024.105951

Analys av grön infrastruktur för barrnaturskog inom projektområde för planerad vindpark vid Trollugnsberget

Sofia Berg, Annie Jonsson

2023. Rapport.

Dangerous Waters: The Impact of the 2004 Indian Ocean Tsunami on Survivor Dream Content

Monica Bergman, Oskar MacGregor, Henri Olkoniemi, Rickard Redgård, Antti Revonsuo, Katja Valli

Dreaming (New York, N.Y.)

2023. Artikel. https://doi.org/10.1037/drm0000254

Mediation analysis of conspiratorial thinking and anti-expert sentiments on vaccine willingness

Angélique M. Blackburn, Hyemin Han, Rebekah A. Gelpí, Sabrina Stöckli, Alma Jeftić, Brendan Ch'ng, Karolina Koszałkowska, David Lacko, Taciano L. Milfont, Yookyung Lee, COVIDiSTRESS II Consortium, Sara Vestergren

Health Psychology

2023. Artikel. https://doi.org/10.1037/hea0001268

A red listing gap analysis of molluscs and crustaceans in Northern Europe: What has happened in the last 10 years?

Sarah J. Bourlat, Georg F. Tschan, Sebastian Martin, Muhammad Iqram, Sonja Leidenberger

Biological Conservation

2023. Artikel. https://doi.org/10.1016/j.biocon.2023.110247 Open Access

Transcriptional biomarkers of toxicity – powerful tools or random noise?: An applied perspective from studies on bivalves

Gustaf Magnus Oskar Ekelund Ugge

2023. Doktorsavhandling.

Transcriptional Responses as Biomarkers of General Toxicity: A Systematic Review and Meta-Analysis on Metal-Exposed Bivalves

Gustaf Magnus Oskar Ekelund Ugge, Ullrika Sahlin, Annie Jonsson, Olof Berglund

Environmental Toxicology and Chemistry

2023. Artikel, forskningsöversikt. https://doi.org/10.1002/etc.5494 Open Access

Analys av infrastruktur för biologisk mångfald i Biosfärområde Vänerskärgården med Kinnekulle: ett planeringsunderlag för bevarande av biologisk mångfald och prioritering utifrån ett landskapsperspektiv

Annie Jonsson, Sofia Berg

2023. Rapport.

Decreased Thalamic Activity Is a Correlate for Disconnectedness during Anesthesia with Propofol, Dexmedetomidine and Sevoflurane But Not S-Ketamine

Oskari Kantonen, Lauri Laaksonen, Michael Alkire, Annalotta Scheinin, Jaakko Långsjö, Roosa E. Kallionpää, Kaike Kaisti, Linda Radek, Jarkko Johansson, Timo Laitio, Anu Maksimow, Joonas Scheinin, Mikko Nyman, Mika Scheinin, Olof Solin et al.

Journal of Neuroscience

2023. Artikel. https://doi.org/10.1523/jneurosci.2339-22.2023 Open Access

A comprehensive mechanistic model of adipocyte signaling with layers of confidence

William Lövfors, Rasmus Magnusson, Cecilia Jönsson, Mika Gustafsson, Charlotta S. Olofsson, Gunnar Cedersund, Elin Nyman

npj Systems Biology and Applications

2023. Artikel. https://doi.org/10.1038/s41540-023-00282-9 Open Access

Svensk etikprövning har mycket att lära av EU

Oskar MacGregor

Curie

2023. Artikel. Open Access

Artificial intelligence supports automated characterization of differentiated human pluripotent stem cells

Katarzyna Marzec-Schmidt, Nidal Ghosheh, Sören Richard Stahlschmidt, Barbara Küppers-Munther, Jane Synnergren, Benjamin Ulfenborg

Stem Cells

2023. Artikel. https://doi.org/10.1093/stmcls/sxad049 Open Access

A new flexible model for maintenance and feeding expenses that improves description of individual growth in insects

Karl Mauritsson, Tomas Jonsson

Scientific Reports

2023. Artikel. https://doi.org/10.1038/s41598-023-43743-1 Open Access

Lipid Nanoparticles Deliver the Therapeutic VEGFA mRNA In Vitro and In Vivo and Transform Extracellular Vesicles for Their Functional Extensions

Muhammad Nawaz, Sepideh Heydarkhan-Hagvall, Benyapa Tangruksa, Hernán González-King Garibotti, Yujia Jing, Marco Maugeri, Franziska Kohl, Leif Hultin, Azadeh Reyahi, Alessandro Camponeschi, Bengt Kull, Jonas Christoffersson, Ola Grimsholm, Karin Jennbacken, Martina Sundqvist et al.

Advanced Science

2023. Artikel. https://doi.org/10.1002/advs.202206187 Open Access

Free-living colonies of native honey bees (Apis mellifera mellifera) in 19th and early 20th century Sweden

Mats Niklasson, Emil Svensson, Sonja Leidenberger, Niclas Norrström, Elizabeth Crawford

Journal of Insect Conservation

2023. Artikel. https://doi.org/10.1007/s10841-023-00541-4 Open Access

Intelligence, super-intelligence, superintelligence++, and ChatGPT: Searching for Substance amidst the Hype

Joel Parthemore

Proceedings of the AISB Convention 2023: Swansea University 13/14 April 2023

2023. Konferensbidrag. Open Access

Artefactual ethics as opportunity to rethink “natural” ethics

Joel Parthemore, Blay Whitby

Proceedings of the AISB Convention 2023: Swansea University 13/14 April 2023

2023. Konferensbidrag. Open Access

Alexithymia and emotion regulation

David A. Preece, Ashish Mehta, Kate Petrova, Pilleriin Sikka, Johan Bjureberg, Rodrigo Becerra, James J. Gross

Journal of Affective Disorders

2023. Artikel. https://doi.org/10.1016/j.jad.2022.12.065

The Perth Alexithymia Questionnaire-Short Form (PAQ-S): A 6-item measure of alexithymia

David A. Preece, Ashish Mehta, Kate Petrova, Pilleriin Sikka, Johan Bjureberg, Wai Chen, Rodrigo Becerra, Alfred Allan, Ken Robinson, James J. Gross

Journal of Affective Disorders

2023. Artikel. https://doi.org/10.1016/j.jad.2023.01.036 Open Access

Still or sparkling?: Past, Present and Future in Bohm’s Implicate Order Approach

Paavo Pylkkänen

Past. Future. Philosophy.: Proceedings of the Philosophical Society of Finland Colloquium 2022

2023. Kapitel i bok. Open Access

Praxis perspectives on doctoral supervision from across disciplines

Rebecca Rouse, Andreas Kalckert, Kathleen Mahoon

Journal of Praxis in Higher Education

2023. Artikel, editorial. https://doi.org/10.47989/kpdc528 Open Access

Regional transcriptomic profiling reveals immune system enrichment in nonfailing atria as well as all chambers of the failing human heart

Mikael Sandstedt, Kristina Vukusic, Markus Johansson, Marianne Jonsson, Rasmus Magnusson, Lillemor Mattsson Hultén, Göran Dellgren, Anders Jeppsson, Anders Lindahl, Jane Synnergren, Joakim Sandstedt

American Journal of Physiology. Heart and Circulatory Physiology

2023. Artikel. https://doi.org/10.1152/ajpheart.00438.2023

Unraveling the regulatory role of MYC2 on ASMT gene expression in wheat: Implications for melatonin biosynthesis and drought tolerance

Roohollah Shamloo-Dashtpagerdi, Angelica Lindlöf, Javad Nouripour-Sisakht

Physiologia Plantarum

2023. Artikel. https://doi.org/10.1111/ppl.14015

Affect Across the Wake-Sleep Cycle

Pilleriin Sikka, James J. Gross

Affective Science

2023. Artikel. https://doi.org/10.1007/s42761-023-00204-2 Open Access

Individual differences in peace of mind reflect adaptive emotion regulation

Pilleriin Sikka, Antti Revonsuo, James J. Gross

Personality and Individual Differences

2023. Artikel. https://doi.org/10.1016/j.paid.2023.112378 Open Access

Expression of Stem Cell Niche-Related Biomarkers at the Base of the Human Tricuspid Valve

Jacob Sjölin, Marianne Jonsson, Charlotta Orback, Anders Oldfors, Anders Jeppsson, Jane Synnergren, Victoria Rotter Sopasakis, Kristina Vukusic

Stem Cells and Development

2023. Artikel. https://doi.org/10.1089/scd.2022.0253 Open Access

Loss of species and genetic diversity during colonization: Insights from acanthocephalan parasites in northern European seals

Ludmila Sromek, Eeva Ylinen, Mervi Kunnasranta, Simo N. Maduna, Tuula Sinisalo, Craig T. Michell, Kit M. Kovacs, Christian Lydersen, Evgeny Ieshko, Elena Andrievskaya, Vyacheslav Alexeev, Sonja Leidenberger, Snorre B. Hagen, Tommi Nyman

Ecology and Evolution

2023. Artikel. https://doi.org/10.1002/ece3.10608 Open Access

Predicting Cancer Stage from Circulating microRNA: A Comparative Analysis of Machine Learning Algorithms

Sören Richard Stahlschmidt, Benjamin Ulfenborg, Jane Synnergren

Bioinformatics and Biomedical Engineering: 10th International Work-Conference, IWBBIO 2023, Meloneras, Gran Canaria, Spain, July 12–14, 2023, Proceedings, Part I

2023. Konferensbidrag. https://doi.org/10.1007/978-3-031-34953-9_8

Subjective experiences during dexmedetomidine- or propofol-induced unresponsiveness and non-rapid eye movement sleep in healthy male subjects

Katja Valli, Linda Radek, Roosa E. Kallionpää, Annalotta Scheinin, Jaakko Långsjö, Kaike Kaisti, Oskari Kantonen, Jarno Korhonen, Tero Vahlberg, Antti Revonsuo, Harry Scheinin

British Journal of Anaesthesia

2023. Artikel. https://doi.org/10.1016/j.bja.2023.04.026 Open Access

Neural electrophysiological correlates of detection and identification awareness

Stefan Wiens, Annika Andersson, Josef Gravenfors

Cognitive, Affective, & Behavioral Neuroscience

2023. Artikel. https://doi.org/10.3758/s13415-023-01120-5 Open Access

Food webs coupled in space: Consumer foraging movement affects both stocks and fluxes

Kate L. Wootton, Alva Curtsdotter, Riccardo Bommarco, Tomas Roslin, Tomas Jonsson

Ecology

2023. Artikel. https://doi.org/10.1002/ecy.4101 Open Access

Towards a modular theory of trophic interactions

Kate L. Wootton, Alva Curtsdotter, Tomas Roslin, Riccardo Bommarco, Tomas Jonsson

Functional Ecology

2023. Artikel. https://doi.org/10.1111/1365-2435.13954 Open Access

Proteomics reveal biomarkers for diagnosis, disease activity and long-term disability outcomes in multiple sclerosis

Julia Åkesson, Sara Hojjati, Sandra Hellberg, Johanna Raffetseder, Mohsen Khademi, Robert Rynkowski, Ingrid Kockum, Claudio Altafini, Zelmina Lubovac-Pilav, Johan Mellergård, Maria C. Jenmalm, Fredrik Piehl, Tomas Olsson, Jan Ernerudh, Mika Gustafsson

Nature Communications

2023. Artikel. https://doi.org/10.1038/s41467-023-42682-9 Open Access

Personalized tissue-engineered veins – long term safety, functionality and cellular transcriptome analysis in large animals

Klas Österberg, Yalda Bogestål, Lachmi Jenndahl, Tobias Gustafsson-Hedberg, Jane Synnergren, Gustav Holmgren, Eva Bom, Sarunas Petronis, Annika Krona, Jonna S. Eriksson, Jennifer Rosendahl, Veronica Crisostomo, Francisco M. Sanchez-Margallo, Claudia Baez-Diaz, Raimund Strehlc et al.

Biomaterials Science

2023. Artikel. https://doi.org/10.1039/d2bm02011d Open Access

CD4(+) T-cell DNA methylation changes during pregnancy significantly correlate with disease-associated methylation changes in autoimmune diseases

Tejaswi Badam, Sandra Hellberg, Ratnesh B. Mehta, Jeannette Lechner-Scott, Rodney A. Lea, Jorg Tost, Xavier Mariette, Judit Svensson-Arvelund, Colm E. Nestor, Mikael Benson, Göran Berg, Maria C. Jenmalm, Mika Gustafsson, Jan Ernerudh

Epigenetics

2022. Artikel. https://doi.org/10.1080/15592294.2021.1982510 Open Access

Ekologisk funktionalitet av värdekärnor för barrskogar inom Västra Götalands län: Ett strategiskt underlag för planering av förändrad skogsskötsel av barrskogsområden inom Västra Götalands län i syfte att stärka skogarnas förutsättningar att stödja biologisk mångfald och skogens klimatnytta

Sofia Berg, Annie Jonsson, Tomas Jonsson, Nils-Hassan Quttineh

2022. Rapport.

COVIDiSTRESS diverse dataset on psychological and behavioural outcomes one year into the COVID-19 pandemic

COVIDiSTRESS II Consortium, Angélique M. Blackburn, Sara Vestergren, Pilleriin Sikka, Emina Zoletic

Scientific Data

2022. Artikel. https://doi.org/10.1038/s41597-022-01383-6 Open Access

Using Video Footage for Observing Honey Bee Behaviour at Hive Entrances

Elizabeth Crawford, Sonja Leidenberger, Niclas Norrström, Mats Niklasson

Bee World

2022. Artikel. https://doi.org/10.1080/0005772x.2022.2106739 Open Access

MODalyseR—a novel software for inference of disease module hub regulators identified a putative multiple sclerosis regulator supported by independent eQTL data

Hendrik A. de Weerd, Julia Åkesson, Dimitri Guala, Mika Gustafsson, Zelmina Lubovac-Pilav

Bioinformatics Advances

2022. Artikel. https://doi.org/10.1093/bioadv/vbac006 Open Access

Characterization of methylation patterns associated with lifestyle factors and vitamin D supplementation in a healthy elderly cohort from Southwest Sweden

Maria Araceli Díaz Cruz, Benjamin Ulfenborg, Peter Blomstrand, Maria Faresjö, Fredrik Ståhl, Sandra Karlsson

Scientific Reports

2022. Artikel. https://doi.org/10.1038/s41598-022-15924-x Open Access

Instant disembodiment of virtual body parts

Julia Eck, David Dignath, Andreas Kalckert, Roland Pfister

Attention, Perception & Psychophysics

2022. Artikel. https://doi.org/10.3758/s13414-022-02544-w Open Access

Molecular biomarker responses in the freshwater mussel Anodonta anatina exposed to an industrial wastewater effluent

Gustaf Magnus Oskar Ekelund Ugge, Annie Jonsson, Olof Berglund

Environmental Science and Pollution Research

2022. Artikel. https://doi.org/10.1007/s11356-021-15633-4 Open Access

Evaluation of transcriptional biomarkers using a high-resolution regression approach: Concentration-dependence of selected transcripts in copper-exposed freshwater mussels (Anodonta anatina)

Gustaf Magnus Oskar Ekelund Ugge, Annie Jonsson, Anders Walstad, Olof Berglund

Environmental Toxicology and Pharmacology

2022. Artikel. https://doi.org/10.1016/j.etap.2021.103795 Open Access

Modality-specific and modality-general electrophysiological correlates of visual and auditory awareness: Evidence from a bimodal ERP experiment

Dmitri Filimonov, Henry Railo, Antti Revonsuo, Mika Koivisto

Neuropsychologia

2022. Artikel. https://doi.org/10.1016/j.neuropsychologia.2022.108154 Open Access

Can quantum mechanics solve the hard problem of consciousness?

Basil J. Hiley, Paavo Pylkkänen

Consciousness and Quantum Mechanics

2022. Kapitel i bok.

Diagnostic potential of nanoparticle aided assays for MUC16 and MUC1 glycovariants in ovarian cancer

Shruti Jain, Nimrah Nadeem, Benjamin Ulfenborg, Maria Mäkelä, Shamima Afrin Ruma, Joonas Terävä, Kaisa Huhtinen, Janne Leivo, Björg Kristjansdottir, Kim Pettersson, Karin Sundfeldt, Kamlesh Gidwani

International Journal of Cancer

2022. Artikel. https://doi.org/10.1002/ijc.34111 Open Access

Data Mining Identifies CCN2 and THBS1 as Biomarker Candidates for Cardiac Hypertrophy

Markus Johansson, Benyapa Tangruksa, Sepideh Heydarkhan-Hagvall, Anders Jeppsson, Peter Sartipy, Jane Synnergren

Life

2022. Artikel. https://doi.org/10.3390/life12050726 Open Access

Multi-Omics Characterization of a Human Stem Cell-Based Model of Cardiac Hypertrophy

Markus Johansson, Benjamin Ulfenborg, Christian X. Andersson, Sepideh Heydarkhan-Hagvall, Anders Jeppsson, Peter Sartipy, Jane Synnergren

Life

2022. Artikel. https://doi.org/10.3390/life12020293 Open Access

Landskapets förmåga att hålla biologisk mångfald: – en indikator för biologisk mångfald och ett planeringsverktyg för prioritering av markanvändning

Annie Jonsson, Sofia Berg, Nils-Hassan Quttineh, Sonja Leidenberger, Tomas Jonsson

2022. Rapport. Open Access

Bioinformatics analysis of miRNAs in the neuroblastoma 11q-deleted region reveals a role of miR-548l in both 11q-deleted and MYCN amplified tumour cells

Sanja Jurcevic, Simon Keane, Emmy Borgmästars, Zelmina Lubovac-Pilav, Katarina Ejeskär

Scientific Reports

2022. Artikel. https://doi.org/10.1038/s41598-022-24140-6 Open Access

DLG2 impairs dsDNA break repair and maintains genome integrity in neuroblastoma

Simon Keane, Hendrik Arnold de Weerd, Katarina Ejeskär

DNA Repair

2022. Artikel. https://doi.org/10.1016/j.dnarep.2022.103302 Open Access

Vetenskapliga studier av honungsbin

Sonja Leidenberger, Niclas Norrström, Mats Niklasson, Åslög Dahl

Fauna och flora

2022. Artikel.

The Vulnerability of the Developing Brain: Analysis of Highly Expressed Genes in Infant C57BL/6 Mouse Hippocampus in Relation to Phenotypic Annotation Derived From Mutational Studies

Angelica Lindlöf

Bioinformatics and Biology Insights

2022. Artikel. https://doi.org/10.1177/11779322211062722 Open Access

Zapped!: Why Brain Stimulation Does Not Equal Performance Enhancement

Oskar MacGregor

Is Neurodoping Different?

2022. Konferensbidrag, muntlig presentation.

Deep neural network prediction of genome-wide transcriptome signatures – beyond the Black-box

Rasmus Magnusson, Jesper N. Tegnér, Mika Gustafsson

npj Systems Biology and Applications

2022. Artikel. https://doi.org/10.1038/s41540-022-00218-9 Open Access

Lysinibacillus sphaericus mediates stress responses and attenuates arsenic toxicity in Caenorhabditis elegans

Jagadish Chandra Kumar Mangu, Neha Rai, Abul Mandal, Per-Erik Olsson, Jana Jass

Science of the Total Environment

2022. Artikel. https://doi.org/10.1016/j.scitotenv.2022.155377 Open Access

Maternal Transfer and Long-Term Population Effects of PCBs in Baltic Grey Seals Using a New Toxicokinetic–Toxicodynamic Population Model

Karl Mauritsson, Jean-Pierre Desforges, Karin C. Harding

Archives of Environmental Contamination and Toxicology

2022. Artikel. https://doi.org/10.1007/s00244-022-00962-3 Open Access

Microbial biomass for sustainable remediation of wastewater

Neelu Nawani, Aminur Rahman, Abul Mandal

Biomass, Biofuels, Biochemicals: Circular Bioeconomy: Technologies for Waste Remediation

2022. Kapitel i bok. https://doi.org/10.1016/B978-0-323-88511-9.00014-8

Stronger efforts are needed to safeguard the nutrition of school aged children

Maria Nilsson, Cecilia Emilsson, Annie Jonsson, Göran Tomson, Sebastiaan Meijer, Leif Östman, Ulf Magnusson

The BMJ

2022. Artikel, editorial. https://doi.org/10.1136/bmj.o623

Effects of dexmedetomidine, propofol, sevoflurane and S-ketamine on the human metabolome: A randomised trial using nuclear magnetic resonance spectroscopy

Aleksi J. Nummela, Lauri T. Laaksonen, Timo T. Laitio, Roosa E. Kallionpää, Jaakko W. Långsjö, Joonas M. Scheinin, Tero J. Vahlberg, Harri T. Koskela, Viljami Aittomäki, Katja J. Valli, Antti Revonsuo, Mikko Niemi, Markus Perola, Harry Scheinin

European Journal of Anaesthesiology

2022. Artikel. https://doi.org/10.1097/EJA.0000000000001591 Open Access

Circulating oxylipin and bile acid profiles of dexmedetomidine, propofol, sevoflurane, and S-ketamine: a randomised controlled trial using tandem mass spectrometry

Aleksi Nummela, Lauri Laaksonen, Annalotta Scheinin, Kaike Kaisti, Tero Vahlberg, Mikko Neuvonen, Katja Valli, Antti Revonsuo, Markus Perola, Mikko Niemi, Harry Scheinin, Timo Laitio

BJA Open

2022. Artikel. https://doi.org/10.1016/j.bjao.2022.100114 Open Access

Artefactual ethics as opportunity for rethinking “natural” ethics

Joel Parthemore, Blay Whitby

Proceedings of the 17th SweCog Conference: Örebro 2022, 16-17 June

2022. Konferensbidrag. Open Access

Is the Brain Analogous to a Quantum Measuring Apparatus?

Paavo Pylkkänen

Metaphors and Analogies in Sciences and Humanities: Words and Worlds

2022. Kapitel i bok. https://doi.org/10.1007/978-3-030-90688-7_11

Henry Railo, Anni Varjonen, Minna Lehtonen, Pilleriin Sikka

Neurobiology of Language

2022. Artikel. https://doi.org/10.1162/nol_a_00080 Open Access

Human intracardiac SSEA4+CD34- cells show features of cycling, immature cardiomyocytes and are distinct from Side Population and C-kit+CD45- cells

Mikael Sandstedt, Kristina Vukusic, Benjamin Ulfenborg, Marianne Jonsson, Lillemor Mattsson Hultén, Göran Dellgren, Anders Jeppsson, Jane Synnergren, Joakim Sandstedt

PLOS ONE

2022. Artikel. https://doi.org/10.1371/journal.pone.0269985 Open Access

A systems biology study unveils the association between a melatonin biosynthesis gene, O-methyl transferase 1 (OMT1) and wheat (Triticum aestivum L.) combined drought and salinity stress tolerance

Roohollah Shamloo-Dashtpagerdi, Massume Aliakbari, Angelica Lindlöf, Sirus Tahmasebi

Planta

2022. Artikel. https://doi.org/10.1007/s00425-022-03885-4

Evidence that miR168a contributes to salinity tolerance of Brassica rapa L. via mediating melatonin biosynthesis

Roohollah Shamloo‐Dashtpagerdi, Angelica Lindlöf, Sirous Tahmasebi

Physiologia Plantarum

2022. Artikel. https://doi.org/10.1111/ppl.13790

Negative dream affect is associated with next-day affect level, but not with affect reactivity or affect regulation

Pilleriin Sikka, Hilda Engelbrektsson, Jinxiao Zhang, James J. Gross

Frontiers in Behavioral Neuroscience

2022. Artikel. https://doi.org/10.3389/fnbeh.2022.981289 Open Access

The neural bases of expressive suppression: A systematic review of functional neuroimaging studies

Pilleriin Sikka, Jonathan Stenberg, Victor Vorobyev, James J. Gross

Neuroscience & Biobehavioral Reviews

2022. Artikel, forskningsöversikt. https://doi.org/10.1016/j.neubiorev.2022.104708 Open Access

The super-stroker: An open-source tool to induce the rubber hand illusion

Anantha Krishna Sivasubramanian, Jo-Han Ng, Hon Chan, Josiah Kai Yi Yong, Andreas Kalckert

Psychology of Consciousness

2022. Artikel. https://doi.org/10.1037/cns0000284

Multimodal deep learning for biomedical data fusion: a review

Sören Richard Stahlschmidt, Benjamin Ulfenborg, Jane Synnergren

Briefings in Bioinformatics

2022. Artikel, forskningsöversikt. https://doi.org/10.1093/bib/bbab569 Open Access

‘No Man is an Island’: Effects of social seclusion on social dream content and REM sleep

Jarno Tuominen, Henri Olkoniemi, Antti Revonsuo, Katja Valli

British Journal of Psychology

2022. Artikel. https://doi.org/10.1111/bjop.12515 Open Access

Beyond body size-new traits for new heights in trait-based modelling of predator-prey dynamics

Kate L. Wootton, Alva Curtsdotter, Tomas Jonsson, H. T. Banks, Riccardo Bommarco, Tomas Roslin, Amanda N. Laubmeier

PLOS ONE

2022. Artikel. https://doi.org/10.1371/journal.pone.0251896 Open Access

Studies on Biosmotrap: A multipurpose biological air purifier to minimize indoor and outdoor air pollution

Priti Yewale, Neeta Wagle, Shaurya Lenka, Pramila Bannigol, Manisha Junnarkar, Divya Prakash, Abul Mandal, Cecilia Stigh, Tushar Sahasrabudhe, Tejas Vannalwar, Prasad Thakare, Dhiraj Nikam, Sarika Pawar, Neelu Nawani

Journal of Cleaner Production

2022. Artikel. https://doi.org/10.1016/j.jclepro.2022.132001

Rubisco activase A (RcaA) is a central node in overlapping gene network of drought and salinity in Barley (Hordeum vulgare L.) and may contribute to combined stress tolerance

Massume Aliakbari, Stephen P. Cohen, Angelica Lindlöf, Roohollah Shamloo-Dashtpagerdi

Plant physiology and biochemistry (Paris)

2021. Artikel. https://doi.org/10.1016/j.plaphy.2021.02.016

A validated generally applicable approach using the systematic assessment of disease modules by GWAS reveals a multi-omic module strongly associated with risk factors in multiple sclerosis

Tejaswi V. S. Badam, Hendrik A. de Weerd, David Martínez-Enguita, Tomas Olsson, Lars Alfredsson, Ingrid Kockum, Maja Jagodic, Zelmina Lubovac-Pilav, Mika Gustafsson

BMC Genomics

2021. Artikel. https://doi.org/10.1186/s12864-021-07935-1 Open Access

Proceedings of the 16th SweCog Conference

Erik Billing, Andreas Kalckert

2021. Redaktörskap (proceedings).

Dream Sharing and the Enhancement of Empathy: Theoretical and Applied Implications

Mark Blagrove, Julia Lockheart, Michelle Carr, Shanice Basra, Harriet Graham, Hannah Lewis, Emily Murphy, Ausrine Sakalauskaite, Caitlin Trotman, Katja Valli

Dreaming (New York, N.Y.)

2021. Artikel. https://doi.org/10.1037/drm0000165

Unraveling the Metabolic Derangements Occurring in Non-infarcted Areas of Pig Hearts With Chronic Heart Failure

Cláudia Correia, Qing-Dong Wang, Gunilla Linhardt, Leif G. Carlsson, Benjamin Ulfenborg, Anna Walentinsson, Katarina Rydén-Markinhutha, Margareta Behrendt, Johannes Wikström, Peter Sartipy, Karin Jennbacken, Jane Synnergren

Frontiers in Cardiovascular Medicine

2021. Artikel. https://doi.org/10.3389/fcvm.2021.753470 Open Access

Computational characterization and expression profile of MTP1 gene associated with zinc homeostasis across dicot plant species

Umi Das, A. F. M. Mohabubul Haque, Md Azizul Bari, Abul Mandal, Ahmad Humayan Kabir

Gene Reports

2021. Artikel. https://doi.org/10.1016/j.genrep.2021.101073

Introduction to the Special Issue on Computational Modelling of Emotion

Celso de Melo, Dean Petters, Joel Parthemore, David Moffatt, Christian Becker-Asano

IEEE Transactions on Affective Computing

2021. Artikel, editorial. https://doi.org/10.1109/TAFFC.2021.3073214

Embryo-Like Features in Developing Bacillus subtilis Biofilms

Momir Futo, Luka Opašić, Sara Koska, Nina Čorak, Tin Široki, Vaishnavi Ravikumar, Annika Thorsell, Masa Lenuzzi, Domagoj Kifer, Mirjana Domazet-Lošo, Kristian Vlahoviček, Ivan Mijakovic, Tomislav Domazet-Lošo

Molecular biology and evolution

2021. Artikel. https://doi.org/10.1093/molbev/msaa217 Open Access

No evidence for theta power as a marker of hypnotic state in highly hypnotizable subjects

Seppo Hiltunen, Maria Karevaara, Maarit Virta, Tommi Makkonen, Sakari Kallio, Petri Paavilainen

Heliyon

2021. Artikel. https://doi.org/10.1016/j.heliyon.2021.e06871 Open Access

An urban Blitz with a twist: rapid biodiversity assessment using aquatic environmental DNA

Kamil Hupało, Markus Majaneva, Molly Victoria Czachur, Lucas Sire, Daniel Marquina, Darío A. Lijtmaer, Vladislav Ivanov, Sonja Leidenberger, Fedor, Jr Čiampor, Zuzana Čiamporová-Zaťovičová, Izabela S. Mendes, Andrea Desiderato, Lasse Topstad, Kenny Meganck, Danial Hariz Z. A. et al.

Environmental DNA

2021. Artikel. https://doi.org/10.1002/edn3.152 Open Access

Robustness of life histories to environmental variability in complex versus simple life cycles

Annie Jonsson

Theoretical Ecology

2021. Artikel. https://doi.org/10.1007/s12080-021-00501-1 Open Access

The body in the German neurology of the early twentieth century

Andreas Kalckert

Body Schema and Body Image: New Directions

2021. Kapitel i bok. https://doi.org/10.1093/oso/9780198851721.003.0007

Time to update our suggestibility scales

Sakari Kallio

Consciousness and Cognition

2021. Artikel, letter. https://doi.org/10.1016/j.concog.2021.103103

Inventering av invasiva främmande arter i Vänern – Kinesisk ullhandskrabba

Sonja Leidenberger, Andrea Kilströmer, Matthew Herring, Eric Bergwall

2021. Rapport.

Why are so many Northern European aquatic invertebrates missing in red-listing and how can we improve assessments for those?

Sonja Leidenberger, Iqram Muhammed, Sarah J. Bourlat

1st DNAQUA International Conference 2021

2021. Konferensbidrag, muntlig presentation med abstract. Open Access

Nyaste rön från INTERREG projektet – Bistånd till nordiska bin – unik resurs för framtidens ekosystemtjänster

Sonja Leidenberger, Niclas Norrström, Mats Niklasson

NordBi-Aktuellt

2021. Artikel. Open Access

Stress and worry in the 2020 coronavirus pandemic: relationships to trust and compliance with preventive measures across 48 countries in the COVIDiSTRESS global survey

Andreas Lieberoth, Shiang-Yi Lin, Sabrina Stöckli, Hyemin Han, Marta Kowal, Rebekah Gelpi, Stavroula Chrona, Thao Phuong Tran, Alma Jeftić, Jesper Rasmussen, Huseyin Cakal, Taciano L. Milfont, Pilleriin Sikka

Royal Society Open Science

2021. Artikel. https://doi.org/10.1098/rsos.200589 Open Access

Consideration should be given to smoking, endometriosis, renal function (eGFR) and age when interpreting CA125 and HE4 in ovarian tumor diagnostics

Maria Lycke, Benjamin Ulfenborg, Jacob Malchau Lauesgaard, Björg Kristjansdottir, Karin Sundfeldt

Clinical Chemistry and Laboratory Medicine

2021. Artikel. https://doi.org/10.1515/cclm-2021-0510 Open Access

TFTenricher: a python toolbox for annotation enrichment analysis of transcription factor target genes

Rasmus Magnusson, Zelmina Lubovac-Pilav

BMC Bioinformatics

2021. Artikel. https://doi.org/10.1186/s12859-021-04357-4 Open Access

Region‐of‐interest analysis approaches in neuroimaging studies of body ownership: An activation likelihood estimation meta‐analysis

Martin Nilsson, Andreas Kalckert

European Journal of Neuroscience

2021. Artikel. https://doi.org/10.1111/ejn.15534 Open Access

Winter weight loss of different subspecies of honey bee Apis mellifera colonies (Linnaeus, 1758) in southwestern Sweden

Niclas Norrström, Mats Niklasson, Sonja Leidenberger

PLOS ONE

2021. Artikel. https://doi.org/10.1371/journal.pone.0258398 Open Access

The Overselling of Super-intelligence: Or, Why Skynet (Probably!) Isn’t Taking Over Any Time Soon

Joel Parthemore

Proceedings of the 16th SweCog Conference

2021. Konferensbidrag. Open Access

Will the real artist stand up?: Computational creativity as mirror to the human soul

Joel Parthemore

AISB Convention 2021: Communication and Conversations

2021. Konferensbidrag.

How to lose a hand: Sensory updating drives disembodiment

Roland Pfister, Annika L. Klaffehn, Andreas Kalckert, Wilfried Kunde, David Dignath

Psychonomic Bulletin & Review

2021. Artikel. https://doi.org/10.3758/s13423-020-01854-0 Open Access

Kan medvetandet påverka materia?

Paavo Pylkkänen

Fri vilja och mänskligt ansvar: Illusion eller verklighet?

2021. Kapitel i bok.

Variation in predation regime drives sex-specific differences in mosquitofish foraging behaviour

Varpu Pärssinen, Kaj Hulthén, Christer Brönmark, Caroline Björnerås, Gustaf Ekelund Ugge, Raphael Gollnisch, Lars-Anders Hansson, Simon David Herzog, Nan Hu, Emma Johansson, Marcus Lee, Karin Rengefors, Yongcui Sha, Martin Škerlep, Jerker Vinterstare et al.

Oikos

2021. Artikel. https://doi.org/10.1111/oik.08335 Open Access

On no man's land: Subjective experiences during unresponsive and responsive sedative states induced by four different anesthetic agents

Linda Radek, Lauri Koskinen, Nils Sandman, Lauri Laaksonen, Roosa E. Kallionpää, Annalotta Scheinin, Ville Rajala, Anu Maksimow, Timo Laitio, Antti Revonsuo, Harry Scheinin, Katja Valli

Consciousness and Cognition

2021. Artikel. https://doi.org/10.1016/j.concog.2021.103239 Open Access

The explanatory gap: Progress and Problems

Antti Revonsuo

Psychology of Consciousness

2021. Artikel. https://doi.org/10.1037/cns0000271

Identification of patches with high ecological importance of broadleaved forests and open lands with valuable trees in Valle: Using a biodiversity capacity landscape metric, combining area and connectivity, to examining management options

Henrik Roos, Sofia Berg, Annie Jonsson, Tomas Jonsson, Maria Thordarson

2021. Rapport. Open Access

The Architecture Of Algorithm-Driven Persuasion

Jeremy Rose, Oskar MacGregor

Journal of Information Architecture

2021. Artikel. Open Access

Heart failure drug titration, discontinuation, mortality and heart failure hospitalization risk: a multinational observational study (US, UK and Sweden)

Gianluigi Savarese, Johan Bodegard, Anna Norhammar, Peter Sartipy, Marcus Thuresson, Martin R. Cowie, Gregg C. Fonarow, Muthiah Vaduganathan, Andrew J. S. Coats

European Journal of Heart Failure

2021. Artikel. https://doi.org/10.1002/ejhf.2271 Open Access

Foundations of human consciousness: Imaging the twilight zone

Annalotta Scheinin, Oskari Kantonen, Michael Alkire, Jaakko Långsjö, Roosa E. Kallionpää, Kaike Kaisti, Linda Radek, Jarkko Johansson, Nils Sandman, Mikko Nyman, Mika Scheinin, Tero Vahlberg, Antti Revonsuo, Katja Valli, Harry Scheinin

Journal of Neuroscience

2021. Artikel. https://doi.org/10.1523/JNEUROSCI.0775-20.2020 Open Access

Nightmare Distress Questionnaire: associated factors

Michael Schredl, Finnja Schramm, Katja Valli, Erik M. Mueller, Nils Sandman

Journal of Clinical Sleep Medicine (JCSM)

2021. Artikel. https://doi.org/10.5664/jcsm.8824

Diel vertical migration of copepods and its environmental drivers in subtropical Bahamian blue holes

Yongcui Sha, Huan Zhang, Marcus Lee, Caroline Björnerås, Martin Škerlep, Raphael Gollnisch, Simon D. Herzog, Gustaf Magnus Oskar Ekelund Ugge, Jerker Vinterstare, Nan Hu, Varpu Pärssinen, Kaj Hulthén, P. Anders Nilsson, Karin Rengefors, Christer Brönmark et al.

Aquatic Ecology

2021. Artikel. https://doi.org/10.1007/s10452-020-09807-4 Open Access

The dynamics of affect across the wake-sleep cycle: From waking mind-wandering to night-time dreaming

Pilleriin Sikka, Katja Valli, Antti Revonsuo, Jarno Tuominen

Consciousness and Cognition

2021. Artikel. https://doi.org/10.1016/j.concog.2021.103189 Open Access

Brain organoid formation on decellularized porcine brain ECM hydrogels

Robin Simsa, Theresa Rothenbücher, Hakan Gürbüz, Nidal Ghosheh, Jenny Emneus, Lachmi Jenndahl, David L. Kaplan, Niklas Bergh, Alberto Martinez Serrano, Per Fogelstrand

PLOS ONE

2021. Artikel. https://doi.org/10.1371/journal.pone.0245685 Open Access

Data from a pooled post hoc analysis of 14 placebo-controlled, dapagliflozin treatment studies in patients with type 2 diabetes with and without anemia at baseline

Bergur V. Stefánsson, Hiddo J. L. Heerspink, David C. Wheeler, C. David Sjöström, Peter J. Greasley, Peter Sartipy, Valerie Cain, Ricardo Correa-Rotter

Data in Brief

2021. Artikel. https://doi.org/10.1016/j.dib.2021.107237 Open Access

Segregated brain state during hypnosis

Jarno Tuominen, Sakari Kallio, Valtteri Kaasinen, Henry Railo

Neuroscience of Consciousness

2021. Artikel. https://doi.org/10.1093/nc/niab002 Open Access

Multi-Assignment Clustering: Machine learning from a biological perspective

Benjamin Ulfenborg, Alexander Karlsson, Maria Riveiro, Christian X. Andersson, Peter Sartipy, Jane Synnergren

Journal of Biotechnology

2021. Artikel. https://doi.org/10.1016/j.jbiotec.2020.12.002 Open Access

Predation risk and the evolution of a vertebrate stress response: Parallel evolution of stress reactivity and sexual dimorphism

Jerker Vinterstare, Gustaf Magnus Oskar Ekelund Ugge, Kaj Hulthén, Alexander Hegg, Christer Brönmark, Per Anders Nilsson, Ursula Ronja Zellmer, Marcus Lee, Varpu Pärssinen, Yongcui Sha, Caroline Björnerås, Huan Zhang, Raphael Gollnisch, Simon D. Herzog, Lars-Anders Hansson et al.

Journal of Evolutionary Biology

2021. Artikel. https://doi.org/10.1111/jeb.13918 Open Access

COVIDiSTRESS Global Survey dataset on psychological and behavioural consequences of the COVID-19 outbreak

Yuki Yamada, Dominik-Borna Ćepulić, Tao Coll-Martín, Stéphane Debove, Guillaume Gautreau, Hyemin Han, Jesper Rasmussen, Thao P. Tran, Giovanni A. Travaglino, COVIDiSTRESS Global Survey Consortium, Andreas Lieberoth, Pilleriin Sikka

Scientific Data

2021. Artikel. https://doi.org/10.1038/s41597-020-00784-9 Open Access

Tears evoke the intention to offer social support: A systematic investigation of the interpersonal effects of emotional crying across 41 countries

Janis H. Zickfeld, Pilleriin Sikka, Ad Vingerhoets

Journal of Experimental Social Psychology

2021. Artikel. https://doi.org/10.1016/j.jesp.2021.104137

ComHub: Community predictions of hubs in gene regulatory networks

Julia Åkesson, Zelmina Lubovac-Pilav, Rasmus Magnusson, Mika Gustafsson

BMC Bioinformatics

2021. Artikel. https://doi.org/10.1186/s12859-021-03987-y Open Access

Dynamic peptide-folding mediated biofunctionalization and modulation of hydrogels for 4D bioprinting

Christopher Aronsson, Michael Jury, Sajjad Naeimipour, Fatemeh Rasti Boroojeni, Jonas Christoffersson, Philip Lifwergren, Carl-Fredrik Mandenius, Robert Selegård, Daniel Aili

Biofabrication

2020. Artikel. https://doi.org/10.1088/1758-5090/ab9490 Open Access

The Holocaust as a Lifelong Nightmare: Posttraumatic Symptoms and Dream Content in Polish Auschwitz Survivors 30 Years After World War II

Monica Bergman, Oskar MacGregor, Henri Olkoniemi, Wojciech Owczarski, Antti Revonsuo, Katja Valli

American Journal of Psychology

2020. Artikel. https://doi.org/10.5406/amerjpsyc.133.2.0143

Whole-genome sequencing and gene network modules predict gemcitabine/carboplatin-induced myelosuppression in non-small cell lung cancer patients

Niclas Björn, Tejaswi Badam, Rapolas Spalinskas, Eva Brandén, Hirsh Koyi, Rolf Lewensohn, Luigi De Petris, Zelmina Lubovac-Pilav, Pelin Sahlén, Joakim Lundeberg, Mika Gustafsson, Henrik Gréen

npj Systems Biology and Applications

2020. Artikel. https://doi.org/10.1038/s41540-020-00146-6 Open Access

Inland blue holes of The Bahamas - chemistry and biology in a unique aquatic environment

Caroline Björnerås, Martin Škerlep, Raphael Gollnisch, Simon David Herzog, Gustaf Ekelund Ugge, Alexander Hegg, Nan Hu, Emma Johansson, Marcus Lee, Varpu Pärssinen, Yongcui Sha, Jerker Vinterstare, Huan Zhang, Kaj Hulthén, Christer Brönmark et al.

Fundamental and Applied Limnology

2020. Artikel. https://doi.org/10.1127/fal/2020/1330 Open Access

MODifieR: an ensemble R package for inference of disease modules from transcriptomics networks

Hendrik A. de Weerd, Tejaswi V. S. Badam, David Martínez-Enguita, Julia Åkesson, Daniel Muthas, Mika Gustafsson, Zelmina Lubovac-Pilav

Bioinformatics

2020. Artikel. https://doi.org/10.1093/bioinformatics/btaa235 Open Access

Models of the blood-brain barrier using iPSC-derived cells

Louise Delsing, Anna Herland, Anna Falk, Ryan Hicks, Jane Synnergren, Henrik Zetterberg

Molecular and Cellular Neuroscience

2020. Artikel. https://doi.org/10.1016/j.mcn.2020.103533 Open Access

Transcriptional and biochemical biomarker responses in a freshwater mussel (Anodonta anatina) under environmentally relevant Cu exposure

Gustaf Magnus Oskar Ekelund Ugge, Annie Jonsson, Björn Olsson, Robert Sjöback, Olof Berglund

Environmental Science and Pollution Research

2020. Artikel. https://doi.org/10.1007/s11356-020-07660-4 Open Access

ERP and MEG correlates of visual consciousness: The second decade

Jona Förster, Mika Koivisto, Antti Revonsuo

Consciousness and Cognition

2020. Artikel. https://doi.org/10.1016/j.concog.2020.102917

The presence and prediction of lateralized inattention 7 years post-stroke

Joel Gerafi, Hans Samuelsson, Jo I. Viken, Christina Jern, Christian Blomstrand, Katarina Jood

Acta Neurologica Scandinavica

2020. Artikel. https://doi.org/10.1111/ane.13221

Human Pluripotent Stem Cell-Derived Hepatocytes Show Higher Transcriptional Correlation with Adult Liver Tissue than with Fetal Liver Tissue

Nidal Ghosheh, Barbara Küppers-Munther, Annika Asplund, Christian X. Andersson, Petter Björquist, Tommy B. Andersson, Helena Carén, Stina Simonsson, Peter Sartipy, Jane Synnergren

ACS Omega

2020. Artikel. https://doi.org/10.1021/acsomega.9b03514 Open Access

Subjective ratings of fear are associated with frontal late positive potential asymmetry, but not with early brain activity over the occipital and centro-parietal cortices

Simone Grassini, Pilleriin Sikka, Antti Revonsuo, Mika Koivisto

Psychophysiology

2020. Artikel. https://doi.org/10.1111/psyp.13665 Open Access

Characterization of Human Induced Pluripotent Stem Cell-Derived Hepatocytes with Mature Features and Potential for Modeling Metabolic Diseases

Gustav Holmgren, Benjamin Ulfenborg, Annika Asplund, Karin Toet, Christian X. Andersson, Ann Hammarstedt, Roeland Hanemaaijer, Barbara Küppers-Munther, Jane Synnergren

International Journal of Molecular Sciences

2020. Artikel. https://doi.org/10.3390/ijms21020469 Open Access

Cardiac hypertrophy in a dish: a human stem cell based model

Markus Johansson, Benjamin Ulfenborg, Christian X. Andersson, Sepideh Heydarkhan-Hagvall, Anders Jeppsson, Peter Sartipy, Jane Synnergren

Biology open

2020. Artikel. https://doi.org/10.1242/bio.052381 Open Access

Dark malevolent traits and everyday perceived stress

Petri J. Kajonius, Therese Björkman

Current Psychology

2020. Artikel. https://doi.org/10.1007/s12144-018-9948-x Open Access

Individuals with dark traits have the ability but not the disposition to empathize

Petri J. Kajonius, Therese Björkman

Personality and Individual Differences

2020. Artikel. https://doi.org/10.1016/j.paid.2019.109716

Alpha band frontal connectivity is a state-specific electroencephalographic correlate of unresponsiveness during exposure to dexmedetomidine and propofol

Roosa E. Kallionpää, Katja Valli, Annalotta Scheinin, Jaakko Långsjö, Anu Maksimow, Tero Vahlberg, Antti Revonsuo, Harry Scheinin, George A. Mashour, Duan Li

British Journal of Anaesthesia

2020. Artikel. https://doi.org/10.1016/j.bja.2020.05.068 Open Access

Low DLG2 gene expression, a link between 11q-deleted and MYCN-amplified neuroblastoma, causes forced cell cycle progression, and predicts poor patient survival

Simon Keane, Sophie Améen, Angelica Lindlöf, Katarina Ejeskär

Cell Communication and Signaling

2020. Artikel. https://doi.org/10.1186/s12964-020-00553-6 Open Access

Halvvägs i INTERREG-projketet – BIstånd till Nordiska Bin – Rapport från Sverige

Sonja Leidenberger

NordBi-Aktuellt

2020. Artikel. Open Access

Data on three Baltic species of Corynosoma Lühe, 1905 (Acanthocephala: Polymorphidae) from Baltic grey (Halichoerus grypus) and ringed seals (Pusa hispida)

Sonja Leidenberger, Sven Boström, Matthew T. Wayland

2020. . https://doi.org/10.5061/dryad.np5hqbzq1

Host records and geographical distribution of Corynosoma magdaleni, C. semerme and C. strumosum (Acanthocephala: Polymorphidae)

Sonja Leidenberger, Sven Boström, Matthew Thomas Wayland

Biodiversity Data Journal

2020. Artikel. https://doi.org/10.3897/BDJ.8.e50500 Open Access

Increased Diagnostic Accuracy of Adnexal Tumors with A Combination of Established Algorithms and Biomarkers

Maria Lycke, Benjamin Ulfenborg, Björg Kristjansdottir, Karin Sundfeldt

Journal of Clinical Medicine

2020. Artikel. https://doi.org/10.3390/jcm9020299 Open Access

Modulating dream experience: Noninvasive brain stimulation over the sensorimotor cortex reduces dream movement

Valdas Noreika, Jennifer M. Windt, Markus Kern, Katja Valli, Tiina Salonen, Riitta Parkkola, Antti Revonsuo, Ahmed A. Karim, Tonio Ball, Bigna Lenggenhager

Scientific Reports

2020. Artikel. https://doi.org/10.1038/s41598-020-63479-6 Open Access

A quantum cure for panphobia

Paavo Pylkkänen

The Routledge Handbook of Panpsychism

2020. Kapitel i bok.

Glutathione restores HG-induced morpho-physiological retardations by inducing phytochelatin and oxidative defense in Alfalfa

Md Atikur Rahman, Ahmad Humayan Kabir, Abul Mandal, Swapan Kumar Roy, Yowook Song, Hee Chung Ji, Ki-Won Lee

Biology

2020. Artikel. https://doi.org/10.3390/biology9110364 Open Access

In context: emotional intent and temporal immediacy of contextual descriptions modulate affective ERP components to facial expressions

Katharina M. Rischer, Mattias Savallampi, Anushka Akwaththage, Nicole Salinas Thunell, Carl Lindersson, Oskar MacGregor

Social Cognitive & Affective Neuroscience

2020. Artikel. https://doi.org/10.1093/scan/nsaa071 Open Access

Microbiota alters urinary bladder weight and gene expression

Blanka Roje, Anamaria Elek, Vinko Palada, Joana Bom, Aida Iljazović, Ana Šimić, Lana Sušak, Katarina Vilović, Till Strowig, Kristian Vlahoviček, Janos Terzić

Microorganisms

2020. Artikel. https://doi.org/10.3390/microorganisms8030421 Open Access

Getting Choosy About Whitefish in Lake Vättern: Using Participatory Approaches to Improve Fisheries Selectivity

Alfred Sandström, Johnny Norrgård, Thomas Axenrot, Malin Setzer, Tomas Jonsson

Collaborative Research in Fisheries

2020. Kapitel i bok. https://doi.org/10.1007/978-3-030-26784-1_4

The effects of dapagliflozin on cardio-renal risk factors in patients with type 2 diabetes with or without renin-angiotensin system inhibitor treatment: a post hoc analysis

Rosalie A. Scholtes, Daniël H. van Raalte, Ricardo Correa-Rotter, Robert D. Toto, Hiddo J. L. Heerspink, Valerie Cain, C. David Sjöström, Peter Sartipy, Bergur V. Stefánsson

Diabetes, obesity and metabolism

2020. Artikel. https://doi.org/10.1111/dom.13923 Open Access

Plausible association between drought stress tolerance of barley (Hordeum vulgare L.) and programmed cell death via MC1 and TSN1 genes

Roohollah Shamloo-Dashtpagerdi, Angelica Lindlöf, Massume Aliakbari, Hadi Pirasteh-Anosheh

Physiologia Plantarum

2020. Artikel. https://doi.org/10.1111/ppl.13102

Evolutionary Analysis of the Bacillus subtilis Genome Reveals New Genes Involved in Sporulation

Lei Shi, Abderahmane Derouiche, Santosh Pandit, Shadi Rahimi, Aida Kalantari, Momir Futo, Vaishnavi Ravikumar, Carsten Jers, Venkata R.S.S. Mokkapati, Kristian Vlahoviček, Ivan Mijakovic

Molecular biology and evolution

2020. Artikel. https://doi.org/10.1093/molbev/msaa035 Open Access

Dreams and nightmares in healthy adults and in patients with sleep and neurological disorders

Francesca Siclari, Katja Valli, Isabelle Arnulf

Lancet Neurology

2020. Artikel, forskningsöversikt. https://doi.org/10.1016/S1474-4422(20)30275-1

Dream affect: Conceptual and Methodological Issues in the Study of Emotions and Moods Experienced in Dreams

Pilleriin Sikka

2020. Doktorsavhandling. Open Access

Correction of anemia by dapagliflozin in patients with type 2 diabetes

Bergur V. Stefánsson, Hiddo J. L. Heerspink, David C. Wheeler, C. David Sjöström, Peter J. Greasley, Peter Sartipy, Valerie Cain, Ricardo Correa-Rotter

Journal of diabetes and its complications

2020. Artikel. https://doi.org/10.1016/j.jdiacomp.2020.107729

Transcriptional sex and regional differences in paired human atrial and ventricular cardiac biopsies collected in vivo

Jane Synnergren, Kristina Vukusic, Pierre Dönnes, Marianne Jonsson, Anders Lindahl, Göran Dellgren, Anders Jeppsson, Julia Asp

Physiological Genomics

2020. Artikel. https://doi.org/10.1152/physiolgenomics.00036.2019

Dreaming and Parasomnias in Narcolepsy

Katja Valli, Juha Markkula, Salla Lamusuo

Parasomnia Dreaming: Exploring Other Forms of Sleep Consciousness

2020. Kapitel i bok.

The Dream Catcher experiment: blinded analyses failed to detect markers of dreaming consciousness in EEG spectral power

William Wong, Valdas Noreika, Levente Móró, Antti Revonsuo, Jennifer Windt, Katja Valli, Naotsugu Tsuchiya

Neuroscience of Consciousness

2020. Artikel. https://doi.org/10.1093/nc/niaa006 Open Access

Molecular profiling of multidrug-resistant river water isolates: insights into resistance mechanism and potential inhibitors

Priti Prabhakar Yewale, Kiran Bharat Lokhande, Aishwarya Sridhar, Monika Vaishnav, Faisal Ahmad Khan, Abul Mandal, Kakumani Venkateswara Swamy, Jana Jass, Neelu Nawani

Environmental Science and Pollution Research

2020. Artikel. https://doi.org/10.1007/s11356-019-05738-2

Testing the Empathy Theory of Dreaming: The Relationships Between Dream Sharing and Trait and State Empathy

Mark Blagrove, Sioned Hale, Julia Lockheart, Michelle Carr, Alex Jones, Katja Valli

Frontiers in Psychology

2019. Artikel. https://doi.org/10.3389/fpsyg.2019.01351 Open Access

miRFA: an automated pipeline for microRNA functional analysis with correlation support from TCGA and TCPA expression data in pancreatic cancer

Emmy Borgmästars, Hendrik Arnold de Weerd, Zelmina Lubovac-Pilav, Malin Sund

BMC Bioinformatics

2019. Artikel. https://doi.org/10.1186/s12859-019-2974-3 Open Access

Therapeutic efficacy of dimethyl fumarate in relapsing-remitting multiple sclerosis associates with ROS pathway in monocytes

Karl E. Carlström, Ewoud Ewing, Mathias Granqvist, Alexandra Gyllenberg, Shahin Aeinehband, Sara Lind Enoksson, Antonio Checa, Tejaswi Badam, Jesse Huang, David Gomez-Cabrero, Mika Gustafsson, Faiez Al Nimer, Craig E. Wheelock, Ingrid Kockum, Tomas Olsson et al.

Nature Communications

2019. Artikel. https://doi.org/10.1038/s41467-019-11139-3 Open Access

Ecosystem function in predator-prey food webs: confronting dynamic models with empirical data

Alva Curtsdotter, H. Thomas Banks, John E. Banks, Mattias Jonsson, Tomas Jonsson, Amanda N. Laubmeier, Michael Traugott, Riccardo Bommarco

Journal of Animal Ecology

2019. Artikel. https://doi.org/10.1111/1365-2656.12892

Enhanced xeno-free differentiation of hiPSC-derived astroglia applied in a blood-brain barrier model

Louise Delsing, Therese Kallur, Henrik Zetterberg, Ryan Hicks, Jane Synnergren

Fluids and Barriers of the CNS

2019. Artikel. https://doi.org/10.1186/s12987-019-0147-4 Open Access

Utilizing microphysiological systems and induced pluripotent stem cells for disease modeling: a case study for blood brain barrier research in a pharmaceutical setting

Kristin M. Fabre, Louise Delsing, Ryan Hicks, Nicola Colclough, Damian C. Crowther, Lorna Ewart

Advanced Drug Delivery Reviews

2019. Artikel. https://doi.org/10.1016/j.addr.2018.09.009

Visuospatial inattention and processing speed: Predictors of long-term outcome and patterns of change after ischemic stroke

Joel Gerafi

2019. Doktorsavhandling. Open Access

Diabetic Cardiomyopathy Modelling Using Induced Pluripotent Stem Cell Derived Cardiomyocytes: Recent Advances and Emerging Models

Cecilia Granéli, Ryan Hicks, Gabriella Brolén, Jane Synnergren, Peter Sartipy

Stem Cell Reviews

2019. Artikel. https://doi.org/10.1007/s12015-018-9858-1 Open Access

Visual features and perceptual context modulate attention towards evolutionarily relevant threatening stimuli: Electrophysiological evidence

Simone Grassini, Henry Railo, Katja Valli, Antti Revonsuo, Mika Koivisto

Emotion

2019. Artikel. https://doi.org/10.1037/emo0000434

Processing of natural scenery is associated with lower attentional and cognitive load compared with urban ones

Simone Grassini, Antti Revonsuo, Serena Castellotti, Irene Petrizzo, Viola Benedetti, Mika Koivisto

Journal of Environmental Psychology

2019. Artikel. https://doi.org/10.1016/j.jenvp.2019.01.007

Pattern matters: Snakes exhibiting triangular and diamond-shaped skin patterns modulate electrophysiological activity in human visual cortex

Simone Grassini, Katja Valli, Jérémie Souchet, Fabien Aubret, Giulia V. Segurini, Antti Revonsuo, Mika Koivisto

Neuropsychologia

2019. Artikel. https://doi.org/10.1016/j.neuropsychologia.2019.05.024

Reduction in albuminuria with dapagliflozin cannot be predicted by baseline clinical characteristics or changes in most other risk markers

Hiddo J. L. Heerspink, C. David Sjöström, Silvio E. Inzucchi, Melissa K. Hallow, Valerie A. Cain, Peter Rossing, Bergur V. Stefansson, Peter Sartipy

Diabetes, obesity and metabolism

2019. Artikel. https://doi.org/10.1111/dom.13579 Open Access

The effects of hypnosis and hypnotic suggestions on the mismatch negativity in highly hypnotizable subjects

Seppo Hiltunen, Maarit Virta, Sakari Kallio, Petri Paavilainen

International journal of clinical and experimental hypnosis

2019. Artikel. https://doi.org/10.1080/00207144.2019.1580966

V1 activity during feedforward and early feedback processing is necessary for both conscious and unconscious motion perception

Mikko Hurme, Mika Koivisto, Antti Revonsuo, Henry Railo

NeuroImage

2019. Artikel. https://doi.org/10.1016/j.neuroimage.2018.10.058

Comparison of Whole Genome Sequencing Pipelines for Analysis of Staphylococcus aureus Isolates from Sepsis Patients

Mahnaz Irani Shemirani, Andreas Tilevik, Diana Tilevik, Anna-Karin Pernestig, Helena Enroth

14th Annual Workshop in Systems Biology, University of Skövde, Sweden, 21 November 2019

2019. Konferensbidrag, poster.

Approximations of population growth in a noisy environment: on the dichotomy of non-age and age structure

Annie Jonsson, Uno Wennergren

Theoretical Ecology

2019. Artikel. https://doi.org/10.1007/s12080-018-0391-2 Open Access

Probiotic potential of lactic acid bacteria from fresh vegetables: Application in food preservation

Manisha Junnarkar, Sarika Pawar, Swapnil Gaikwad, Abul Mandal, Jana Jass, Neelu Nawani

Indian Journal of Experimental Biology

2019. Artikel. Open Access

The Future of Personalized Care: Scientific, Measurement, and Practical Advancements in Personality and Brain Disorders

Petri J. Kajonius

Personality and Brain Disorders: Associations and Interventions

2019. Kapitel i bok. https://doi.org/10.1007/978-3-319-90065-0_12

Assessing the Structure of the Five Factor Model of Personality (IPIP-NEO-120) in the Public Domain

Petri Kajonius, John Johnson

Europe's Journal of Psychology

2019. Artikel. https://doi.org/10.5964/ejop.v15i2.1671 Open Access

The influence of dexmedetomidine and propofol on circulating cytokine levels in healthy subjects

Minna Kallioinen, Annalotta Scheinin, Mikael Maksimow, Jaakko Långsjö, Kaike Kaisti, Riikka Takala, Tero Vahlberg, Katja Valli, Marko Salmi, Harry Scheinin, Anu Maksimow

BMC Anesthesiology

2019. Artikel. https://doi.org/10.1186/s12871-019-0895-3 Open Access

Single-subject analysis of N400 event-related potential component with five different methods

Roosa E. Kallionpää, Henri Pesonen, Annalotta Scheinin, Nils Sandman, Ruut Laitio, Harry Scheinin, Antti Revonsuo, Katja Valli

International Journal of Psychophysiology

2019. Artikel. https://doi.org/10.1016/j.ijpsycho.2019.06.012 Open Access

Clinical use of 16SrRNA Ion TorrentNext-generation sequencing and bioinformatics pipeline

Alexander Kokkonen, Diana Tilevik, Anna-Karin Pernestig, Andreas Tilevik, Magnus Fagerlind, Helena Enroth

14th Annual Workshop in Systems Biology, University of Skövde, Sweden, 21 November 2019

2019. Konferensbidrag, poster.

Integrating experimental and distribution data to predict future species patterns

Jonne Kotta, Jarno Vanhatalo, Holger Jänes, Helen Orav-Kotta, Luca Rugiu, Veijo Jormalainen, Ivo Bobsien, Markku Viitasalo, Elina Virtanen, Antonia Nyström Sandman, Martin Isaeus, Sonja Leidenberger, Per R. Jonsson, Kerstin Johannesson

Scientific Reports

2019. Artikel. https://doi.org/10.1038/s41598-018-38416-3 Open Access

Nordiskt honungsbi studeras på Nordens ark

Sonja Leidenberger, Ann-Charlotte Berntsson, Mats Niklasson

Yrfän

2019. Artikel.

Diversitet hos hakmaskar – tarmparasiter hos gråsälar i Östersjön

Sonja Leidenberger, Sven Boström

Fauna och flora

2019. Artikel. Open Access

Morphological observations on three Baltic species of Corynosoma Lühe, 1905 (Acanthocephala, Polymorphidae)

Sonja Leidenberger, Sven Boström, Matthew T. Wayland

European journal of taxonomy

2019. Artikel. https://doi.org/10.5852/ejt.2019.514 Open Access

End biodiversity loss through improved tracking of marine threatened invertebrates

Sonja Leidenberger, Annie Jonsson, Sarah Bourlat

8th International Barcode of Life Conference 2019, June 17-20, 2019, Trondheim, Norway

2019. Konferensbidrag, poster. Open Access

BIstånd till nordiska bin – en resurs för framtidens ekosystemtjänster

Sonja Leidenberger, Mats Niklasson, AnnCharlotte Berntsson

NordBi-Aktuellt

2019. Artikel. Open Access

Lägesrapport inom INTERREG-projektet: BIstånd till nordiska bin

Sonja Leidenberger, Niclas Norrström

NordBi-Aktuellt

2019. Artikel. Open Access

Sex differences in personality are larger in gender equal countries: Replicating and extending a surprising finding

Erik Mac Giolla, Petri J. Kajonius

International Journal of Psychology

2019. Artikel. https://doi.org/10.1002/ijop.12529

Univariate and classification analysis reveals potential diagnostic biomarkers for early stage ovarian cancer Type 1 and Type 2

Simonas Marcišauskas, Benjamin Ulfenborg, Björg Kristjansdottir, Sofia Waldemarson, Karin Sundfeldt

Journal of Proteomics

2019. Artikel. https://doi.org/10.1016/j.jprot.2019.01.017

On the essentially dynamic nature of concepts: Constant if incremental motion in conceptual spaces

Joel Parthemore

Conceptual Spaces: Elaborations and Expectations

2019. Kapitel i bok. https://doi.org/10.1007/978-3-030-12800-5_6

Current Directions in Psychiatric Classification: From the DSM to RDoC

Björn N. Persson

Personality and Brain Disorders: Associations and Interventions

2019. Kapitel i bok. https://doi.org/10.1007/978-3-319-90065-0_11

Searching for Machiavelli but Finding Psychopathy and Narcissism

Björn Persson

Personality Disorders

2019. Artikel. https://doi.org/10.1037/per0000323

Revisiting the Structure of the Short Dark Triad

Björn N. Persson, Petri J. Kajonius, Danilo Garcia

Assessment

2019. Artikel. https://doi.org/10.1177/1073191117701192

Social status as one key indicator of successful psychopathy: An initial empirical investigation

Björn Persson, Scott O. Lilienfeld

Personality and Individual Differences

2019. Artikel. https://doi.org/10.1016/j.paid.2019.01.020

Henry Stapp Vs. David Bohm on Mind, Matter, and Quantum Mechanics

Paavo Pylkkänen

Activitas Nervosa Superior

2019. Artikel. https://doi.org/10.1007/s41470-019-00035-2 Open Access

Quantum Theory and the Place of Mind in the Causal Order of Things

Paavo Pylkkänen

Quanta and Mind: Essays on the Connection between Quantum Mechanics and the Consciousness

2019. Kapitel i bok. https://doi.org/10.1007/978-3-030-21908-6_14

Does TMS on V3 block conscious visual perception?

Niina Salminen-Vaparanta, Mika Koivisto, Victor Vorobyev, Kati Alakurtti, Antti Revonsuo

Neuropsychologia

2019. Artikel. https://doi.org/10.1016/j.neuropsychologia.2017.11.013

LOS2 gene plays a potential role in barley (Hordeum vulgare L.) salinity tolerance as a hub gene

Roohollah Shamloo-Dashtpagerdia, Angelica Lindlöf, Ali Niazi, Hadi Pirasteh-Anosheh

Molecular breeding

2019. Artikel. https://doi.org/10.1007/s11032-019-1026-z

How to Study Dream Experiences

Pilleriin Sikka

Dreams: Understanding Biology, Psychology, and Culture: Volume 1

2019. Kapitel i bok.

EEG Frontal Alpha Asymmetry and Dream Affect: Alpha Oscillations Over the Right Frontal Cortex During REM Sleep and Pre-Sleep Wakefulness Predict Anger in REM Sleep Dreams

Pilleriin Sikka, Antti Revonsuo, Valdas Noreika, Katja Valli

Journal of Neuroscience

2019. Artikel. https://doi.org/10.1523/JNEUROSCI.2884-18.2019

A potential role for rare species in ecosystem dynamics

Torbjörn Säterberg, Tomas Jonsson, Jon Yearsley, Sofia Berg, Bo Ebenman

Scientific Reports

2019. Artikel. https://doi.org/10.1038/s41598-019-47541-6 Open Access

Clinical routine biomarkers in combination for early identification of patients with bacterial sepsis

Diana Tilevik, Anna-Karin Pernestig, Lars Ljungström

29th European Congress of Clinical Microbiology and Infectious Diseases, ECCMID, Amsterdam, Netherlands, 13-16 April, 2019

2019. Konferensbidrag, poster. Open Access

Using next-generation sequencing to study biodiversity in Klebsiella spp. isolated from patients with suspected sepsis

Diana Tilevik, Patricia Saxenborn, Andreas Tilevik, Magnus Fagerlind, Zelmina Lubovac-Pilav, Anna-Karin Pernestig, Helena Enroth

29th European Congress of Clinical Microbiology and Infectious Diseases, ECCMID, Amsterdam, Netherlands, 13-16 April, 2019

2019. Konferensbidrag, poster. Open Access

Artificial Intelligence

Vicenç Torra, Alexander Karlsson, H. Joe Steinhauer, Stefan Berglund

Data Science in Practice

2019. Kapitel i bok. https://doi.org/10.1007/978-3-319-97556-6_2

Correction of hypomagnesemia by dapagliflozin in patients with type 2 diabetes: A post hoc analysis of 10 randomized, placebo-controlled trials

Robert D. Toto, Ronald Goldenberg, Glenn M. Chertow, Valerie Cain, Bergur V. Stefánsson, Carl David Sjöström, Peter Sartipy

Journal of diabetes and its complications

2019. Artikel. https://doi.org/10.1016/j.jdiacomp.2019.06.007

Sleep Parameter Assessment Accuracy of a Consumer Home Sleep Monitoring Ballistocardiograph Beddit Sleep Tracker: A Validation Study

Jarno Tuominen, Karoliina Peltola, Tarja Saaresranta, Katja Valli

Journal of Clinical Sleep Medicine (JCSM)

2019. Artikel. https://doi.org/10.5664/jcsm.7682

The Social Simulation Theory

Jarno Tuominen, Antti Revonsuo, Katja Valli

Dreams: Understanding Biology, Psychology, and Culture: Volume 1

2019. Kapitel i bok.

Social contents in dreams: An empirical test of the Social Simulation Theory

Jarno Tuominen, Tuula Stenberg, Antti Revonsuo, Katja Valli

Consciousness and Cognition

2019. Artikel. https://doi.org/10.1016/j.concog.2019.01.017

Predictive Coding and Protoconsciousness

Jarno Tuominen, Katja Valli

Dreams: Understanding Biology, Psychology, and Culture: Volume 1

2019. Kapitel i bok.

Vertical and horizontal integration of multi-omics data with miodin

Benjamin Ulfenborg

BMC Bioinformatics

2019. Artikel. https://doi.org/10.1186/s12859-019-3224-4 Open Access

Emergent quantum mechanics: David Bohm Centennial perspectives

Jan Walleczek, Gerhard Grössing, Paavo Pylkkänen, Basil Hiley

Entropy

2019. Artikel, editorial. https://doi.org/10.3390/e21020113 Open Access

Emergent Quantum Mechanics: David Bohm Centennial Perspectives

Jan Walleczek, Gerhard Grössing, Paavo Pylkkänen, Basil Hiley

2019. Redaktörskap (samlingsverk). https://doi.org/10.3390/books978-3-03897-617-2 Open Access

Dreams: Understanding Biology, Psychology, and Culture: Volume 1

Katja Valli, Robert J. Hoss

2019. Redaktörskap (samlingsverk).

The Content of Dreams

Katja Valli, Robert J. Hoss

Dreams: Understanding Biology, Psychology, and Culture: Volume 1

2019. Kapitel i bok.

The Threat Simulation Theory

Katja Valli, Antti Revonsuo

Dreams: Understanding Biology, Psychology, and Culture: Volume 1

2019. Kapitel i bok.

Batch-normalization of cerebellar and medulloblastoma gene expression datasets utilizing empirically defined negative control genes

Holger Weishaupt, Patrik Johansson, Anders Sundström, Zelmina Lubovac-Pilav, Björn Olsson, Sven Nelander, Fredrik J. Swartling

Bioinformatics

2019. Artikel. https://doi.org/10.1093/bioinformatics/btz066 Open Access

Dreams as Self-Simulation and World Simulation

Jennifer M. Windt, Katja Valli

Dreams: Understanding Biology, Psychology, and Culture: Volume 1

2019. Kapitel i bok.

A GWAS on Helicobacter pylori strains points to genetic variants associated with gastric cancer risk

Elvire Berthenet, Koji Yahara, Kaisa Thorell, Ben Pascoe, Guillaume Meric, Jane M. Mikhail, Lars Engstrand, Helena Enroth, Alain Burette, Francis Megraud, Christine Varon, John C. Atherton, Sinead Smith, Thomas S. Wilkinson, Matthew D. Hitchings et al.

BMC Biology

2018. Artikel. https://doi.org/10.1186/s12915-018-0550-3 Open Access

MicroRNA amplification and detection technologies: opportunities and challenges for point of care diagnostics

Vivek Priy Dave, Tien Anh Ngo, Anna-Karin Pernestig, Diana Tilevik, Krishna Kanit, Trieu Nguyen, Anders Wolff, Dang Duong Bang

Laboratory Investigation

2018. Artikel, forskningsöversikt. https://doi.org/10.1038/s41374-018-0143-3

Barrier properties and transcriptome expression in human iPSC-derived models of the blood-brain barrier

Louise Delsing, Pierre Dönnes, José Sánchez, Maryam Clausen, Dmitrios Voulgaris, Anna Falk, Anna Herland, Gabriella Brolén, Henrik Zetterberg, Ryan Hicks, Jane Synnergren

Stem Cells

2018. Artikel. https://doi.org/10.1002/stem.2908 Open Access

Efficacy and safety of dapagliflozin in patients with type 2 diabetes and moderate renal impairment (chronic kidney disease stage 3A): The DERIVE Study

Paola Fioretto, Stefano Del Prato, John B. Buse, Ronald Goldenberg, Francesco Giorgino, Daniel Reyner, Anna Maria Langkilde, C. David Sjöstrom, Peter Sartipy

Diabetes, obesity and metabolism

2018. Artikel. https://doi.org/10.1111/dom.13413 Open Access

Route optimization as an instrument to improve animal welfare and economics in pre-slaughter logistics

Mikael Frisk, Annie Jonsson, Stefan Sellman, Patrik Flisberg, Mikael Rönnqvist, Uno Wennergren

PLOS ONE

2018. Artikel. https://doi.org/10.1371/journal.pone.0193223 Open Access

IRT analyses of the Swedish Dark Triad Dirty Dozen

Danilo Garcia, Björn Persson, Ali Al Nima, Joel Gruneau Brulin, Max Rapp-Ricciardia, Petri J. Kajonius

Heliyon

2018. Artikel. https://doi.org/10.1016/j.heliyon.2018.e00569 Open Access

Expression profiling of human pluripotent stem cell-derived cardiomyocytes exposed to doxorubicin - integration and visualization of multi omics data

Gustav Holmgren, Peter Sartipy, Christian X. Andersson, Anders Lindahl, Jane Synnergren

Toxicological Sciences

2018. Artikel. https://doi.org/10.1093/toxsci/kfy012

Silicon alleviates arsenic-induced toxicity in wheat through vacuolar sequestration and ROS scavenging

Monayem Hossain, Most Amena Khatun, Najmul Haque, Azizul Bari, Firoz Alam, Abul Mandal, Ahmad Humayan Kabir

International journal of phytoremediation

2018. Artikel. https://doi.org/10.1080/15226514.2018.1425669

Interim Report of the Working Group on Multispecies Assessment Methods (WGSAM)

Daniel Howell, Alexander Kempf, Andrea Belgrano, Robert Thorpe, Morten Vinther, Valerio Bartolino, John Pope, Alfonso Perez Rodriguez, Sarah Gaichas, Santiago Cerviño, Niclas Norrström, Michael Spence, Ching Villanueva, Nataliia Kulatska, Erla Sturludottir et al.

2018. Rapport. Open Access

NIPTeR: an R package for fast and accurate trisomy prediction in non-invasive prenatal testing

Lennart F. Johansson, Hendrik A. de Weerd, Eddy N. de Boer, Freerk van Dijk, Gerard J. Te Meerman, Rolf H. Sijmons, Birgit Sikkema-Raddatz, Morris A. Swertz

BMC Bioinformatics

2018. Artikel. https://doi.org/10.1186/s12859-018-2557-8 Open Access

Predictive power of food web models based on body size decreases with trophic complexity

Tomas Jonsson, Riikka Kaartinen, Mattias Jonsson, Riccardo Bommarco

Ecology Letters

2018. Artikel. https://doi.org/10.1111/ele.12938

Evaluation of Probiotic Potential of Lactic Acid Bacteria Isolated from Different Sources in Western India

Manisha V. Junnarkara, Prasad M. Thakarea, Priti P. Yewalea, Aminur Rahman, Jana Jass, Abul Mandal, Neelu N. Nawani

Food biotechnology

2018. Artikel. https://doi.org/10.1080/08905436.2018.1443825

Sex differences in 30 facets of the five factor model of personality in the large public (N = 320,128)

Petri Kajonius, John Johnson

Personality and Individual Differences

2018. Artikel. https://doi.org/10.1016/j.paid.2018.03.026

Spoken words are processed during dexmedetomidine-induced unresponsiveness

R. E. Kallionpää, A. Scheinin, R. A. Kallionpää, N. Sandman, M. Kallioinen, R. Laitio, T. Laitio, K. Kaskinoro, T. Kuusela, Antti Revonsuo, H. Scheinin, Katja Valli

British Journal of Anaesthesia

2018. Artikel. https://doi.org/10.1016/j.bja.2018.04.032 Open Access

Plasminogen binding inhibitors demonstrate unwanted activities on GABA_A and glycine receptors in human iPSC derived neurons

Lisbeth Kristensson, Anders Lundin, David Gustafsson, Jan Fryklund, Tomas Fex, Louise Delsing, Erik Ryberg

Neuroscience Letters

2018. Artikel. https://doi.org/10.1016/j.neulet.2018.05.018

Novel human iPSC-derived hepatocytes with advanced functionality and long-term 2D cultures of human primary hepatocytes for metabolic disease studies

Barbara Küppers-Munther, A. Asplund, Benjamin Ulfenborg, Jane Synnergren, A. Abadie

Human Gene Therapy

2018. Artikel, meeting abstract. https://doi.org/10.1089/hum.2018.29077.abstracts

Comparative effects of dexmedetomidine, propofol, sevoflurane, and S-ketamine on regional cerebral glucose metabolism in humans: a positron emission tomography study

L. Laaksonen, M. Kallioinen, J. Långsjö, T. Laitio, A. Scheinin, J. Scheinin, K. Kaisti, A. Maksimow, R. E. Kallionpää, V. Rajala, J. Johansson, O. Kantonen, M. Nyman, S. Sirén, Katja Valli et al.

British Journal of Anaesthesia

2018. Artikel. https://doi.org/10.1016/j.bja.2018.04.008 Open Access

Human iPS-Derived Astroglia from a Stable Neural Precursor State Show Improved Functionality Compared with Conventional Astrocytic Models

Anders Lundin, Louise Delsing, Maryam Clausen, Piero Ricchiuto, José Sanchez, Alan Sabirsh, Mei Ding, Jane Synnergren, Henrik Zetterberg, Gabriella Brolén, Ryan Hicks, Anna Herland, Anna Falk

Stem Cell Reports

2018. Artikel. https://doi.org/10.1016/j.stemcr.2018.01.021 Open Access

Humanizing Miniature Hearts through 4-Flow Cannulation Perfusion Decellularization and Recellularization

Duong T. Nguyen, Matthew O'Hara, Cecilia Granéli, Ryan Hicks, Tasso Miliotis, Ann-Christin Nyström, Sara Hansson, Pia Davidsson, Li-Ming Gan, Maria Chiara Magnone, Magnus Althage, Sepideh Heydarkhan-Hagvall

Scientific Reports

2018. Artikel. https://doi.org/10.1038/s41598-018-25883-x Open Access

Rhizobium sp.CCNWYC119: a single strain highly effective as biofertilizer for three different peas (Pigeon pea, Sweet pea and Chick pea)

Ali Mohammad Nushair, Ananda Kumar Saha, Abul Mandal, Md. Anisur Rahman, Moni Krishno Mohanta, Md. Ariful Hasan, Md. Fazlul Haque

Legume Research An International Journal

2018. Artikel. https://doi.org/10.18805/LR-389

Quantum Theories of Consciousness

Paavo Pylkkänen

The Routledge Handbook of Consciousness

2018. Kapitel i bok. https://doi.org/10.4324/9781315676982-17

Dreaming and awareness during dexmedetomidine- and propofol-induced unresponsiveness

L. Radek, R. E. Kallionpää, M. Karvonen, A. Scheinin, A. Maksimow, J. Långsjö, K. Kaisti, T. Vahlberg, Antti Revonsuo, H. Scheinin, Katja Valli

British Journal of Anaesthesia

2018. Artikel. https://doi.org/10.1016/j.bja.2018.03.014 Open Access

Biological naturalism and biological realism

Antti Revonsuo

The Routledge Handbook of Consciousness

2018. Kapitel i bok. https://doi.org/10.4324/9781315676982-15

Foundations of Consciousness

Antti Revonsuo

2018. Bok. https://doi.org/10.4324/9781315115092

High Redundancy as well as Complementary Prey Choice Characterize Generalist Predator Food Webs in Agroecosystems

Eve Roubinet, Tomas Jonsson, Gerard Malsher, Karin Staudacher, Michael Traugott, Barbara Ekbom, Mattias Jonsson

Scientific Reports

2018. Artikel. https://doi.org/10.1038/s41598-018-26191-0 Open Access

Behavioral facilitation and increased brain responses from a high interference working memory context

George Samrani, Petter Marklund, Lisa Engström, Daniel Broman, Jonas Persson

Scientific Reports

2018. Artikel. https://doi.org/10.1038/s41598-018-33616-3 Open Access

Differentiating Drug-related and State-related Effects of Dexmedetomidine and Propofol on the Electroencephalogram

Annalotta Scheinin, Roosa E. Kallionpää, Duan Li, Minna Kallioinen, Kaike Kaisti, Jaakko Långsjö, Anu Maksimow, Tero Vahlberg, Katja Valli, George A. Mashour, Antti Revonsuo, Harry Scheinin

Anesthesiology

2018. Artikel. https://doi.org/10.1097/ALN.0000000000002192

Ataxia-telangiectasia-like disorder in a family deficient for MRE11A, caused by a MRE11 variant

Maryam Sedghi, Mehri Salari, Ali-Reza Moslemi, Ariana Kariminejad, Mark Davis, Hayley Goullée, Björn Olsson, Nigel Laing, Homa Tajsharghi

Neurology: Genetics

2018. Artikel. https://doi.org/10.1212/NXG.0000000000000295 Open Access

Peace of mind and anxiety in the waking state are related to the affective content of dreams

Pilleriin Sikka, Henri Pesonen, Antti Revonsuo

Scientific Reports

2018. Artikel. https://doi.org/10.1038/s41598-018-30721-1 Open Access

Dream emotions: a comparison of home dream reports with laboratory early and late REM dream reports

Pilleriin Sikka, Antti Revonsuo, Nils Sandman, Jarno Tuominen, Katja Valli

Journal of Sleep Research

2018. Artikel. https://doi.org/10.1111/jsr.12555 Open Access

Current Perspectives on Multi-Omics Data Integration With Application on Toxicity Biomarkers Discovery

Jane Synnergren, Pierre Dönnes

Open Access journal of Toxicology

2018. Artikel, forskningsöversikt. https://doi.org/10.19080/OAJT.2018.02.555597 Open Access

Integration of Biomedical Big Data Requires Efficient Batch Effect Reduction

Jane Synnergren, Nidal Ghosheh, Pierre Dönnes

10th International Conference on Bioinformatics and Computational Biology (BICOB): Las Vegas, Nevada, USA 19 – 21 March 2018

2018. Konferensbidrag.

Synthetic generation of spatial graphs

Vicenç Torra, Annie Jonsson, Guillermo Navarro‐Arribas, Julián Salas

International Journal of Intelligent Systems

2018. Artikel. https://doi.org/10.1002/int.22034 Open Access

Correlation and cluster analysis of immunomodulatory drugs based on cytokine profiles

Fredrik K. Wallner, Malin Hultquist Hopkins, Nina Woodworth, Therese Lindvall Bark, Peter Olofsson, Andreas Tilevik

Pharmacological Research

2018. Artikel. https://doi.org/10.1016/j.phrs.2017.10.012 Open Access

A novel maintenance medium extends the life-span and enables long term applications for both human primary hepatocytes and human pluripotent stem cell derived hepatocytes in conventional 2D cultures

Annika Asplund, Jane Synnergren, Christian X. Andersson, Barbara Küppers-Munther

14th European ISSX Meeting, Cologne, Germany, June 26-29, 2017

2017. Konferensbidrag, poster.

Parameter estimation for an allometric food web model

H. T. Banks, J. E. Banks, Riccardo Bommarco, Alva Curtsdotter, Tomas Jonsson, A. N. Laubmeier

International journal of pure and applied mathematics

2017. Artikel. https://doi.org/10.12732/ijpam.v114i1.12 Open Access

Dapagliflozin in patients with type II diabetes mellitus, with and without elevated triglyceride and reduced high-density lipoprotein cholesterol levels

Harold E. Bays, Peter Sartipy, John Xu, Carl David Sjöström, James A. Underberg

Journal of Clinical Lipidology

2017. Artikel. https://doi.org/10.1016/j.jacl.2017.01.018

Human iPSC-derived endothelial cells can develop in to brain-like endothelial cells after coculture with primary human brain cells

Louise Delsing, Jane Synnergren, Ryan Hicks, Henrik Zetterberg

International Symposium for Stem Cell Research, Boston, June 14-17, 2017

2017. Konferensbidrag, poster.

The impact of personality on person-centred care: a study of care staff in Swedish nursing homes

Tinna Elfstrand Corlin, Petri J. Kajonius, Ali Kazemi

International Journal of Older People Nursing

2017. Artikel. https://doi.org/10.1111/opn.12132

Long-term functional outcome after ischemic stroke: Prognostic value of early identification of neglect and aphasia

Joel Gerafi

2017. Licentiatavhandling.

Neglect and aphasia in the acute phase as predictors of functional outcome 7 years after ischemic stroke

Joel Gerafi, H. Samuelsson, J. I. Viken, C. Blomgren, L. Claesson, Sakari Kallio, C. Jern, C. Blomstrand, K. Jood

European Journal of Neurology

2017. Artikel. https://doi.org/10.1111/ene.13406

Comparative transcriptomics of hepatic differentiation of human pluripotent stem cells and adult human liver tissue

Nidal Ghosheh, Barbara Küppers-Munther, Annika Asplund, Josefina Edsbagge, Benjamin Ulfenborg, Tommy B. Andersson, Petter Björquist, Christian X. Andersson, Helena Carén, Stina Simonsson, Peter Sartipy, Jane Synnergren

Physiological Genomics

2017. Artikel. https://doi.org/10.1152/physiolgenomics.00007.2017 Open Access

Towards a Clinical Support System for the Early Diagnosis of Sepsis

Tove Helldin, Anna-Karin Pernestig, Diana Tilevik

Digital Human Modeling - Applications in Health, Safety, Ergonomics, and Risk Management: Health and Safety: 8th International Conference, DHM 2017 Held as Part of HCI International 2017 Vancouver, BC, Canada, July 9–14, 2017, Proceedings, Part II

2017. Konferensbidrag. https://doi.org/10.1007/978-3-319-58466-9_3

Report of the Working Group on Multispecies Assessment Methods (WGSAM), 10-14 October 2016, Reykjavik, Iceland

Daniel Howell, Alexander Kempf, Barbara Bauer, Andrea Belgrano, Robert Thorpe, Morten Vinther, Valerio Bartolino, John Pope, Sigrid Lehuta, Sarah Gaichas, Sean Lucey, Niclas Norrström, Michael Spence, Noél Holmgren, Ching Villanueva et al.

2017. Rapport. Open Access

Early processing in primary visual cortex is necessary for conscious and unconscious vision while late processing is necessary only for conscious vision in neurologically healthy humans

Mikko Hurme, Mika Koivisto, Antti Revonsuo, Henry Railo

NeuroImage

2017. Artikel. https://doi.org/10.1016/j.neuroimage.2017.02.060

Conditions for Eltonian Pyramids in Lotka-Volterra Food Chains

Tomas Jonsson

Scientific Reports

2017. Artikel. https://doi.org/10.1038/s41598-017-11204-1 Open Access

Metabolic theory predicts animal self-thinning

Tomas Jonsson

Journal of Animal Ecology

2017. Artikel. https://doi.org/10.1111/1365-2656.12638

Vetenskaplig utvärdering av åtgärdseffekter mot almsjukan inom projektet LifeELMIAS: Rapport till Naturvårdsverket 2017-10-31

Annie Jonsson

2017. Rapport.

Rare but Important: Perturbations to Uncommon Species Can Have a Large Impact on the Structure of Ecological Communities

Tomas Jonsson, Sofia Berg, Torbjörn Säterberg, Céline Hauzy, Bo Ebenman

Adaptive Food Webs: Stability and Transitions of Real and Model Ecosystems

2017. Kapitel i bok. https://doi.org/10.1017/9781316871867.021

Utvärdering av Hornborgasjöns restaurering: måluppfyllelse och effekter på biologisk mångfald med fokus på vegetation och fågelfauna

Annie Jonsson, Tomas Jonsson, Per Toräng

2017. Rapport.

Cross-cultural personality differences between East Asia and Northern Europe in IPIP-NEO

Petri J. Kajonius

International Journal of Personality Psychology

2017. Artikel. Open Access

The Short Personality Inventory for DSM-5 and its Conjoined structure with the Common Five-Factor Model

Petri J. Kajonius

International Journal of Testing

2017. Artikel. https://doi.org/10.1080/15305058.2017.1309421

Who gets ahead in life?: Personality traits and childhood background in economic success

Petri J. Kajonius, Anders Carlander

Journal of Economic Psychology

2017. Artikel. https://doi.org/10.1016/j.joep.2017.03.004

Conceptualizations of Personality Disorders with the Five Factor Model-count and Empathy Traits

Petri J. Kajonius, Anna M. Dåderman

International Journal of Testing

2017. Artikel. https://doi.org/10.1080/15305058.2017.1279164

Personality traits across countries: Support for similarities rather than differences

Petri Kajonius, Erik Mac Giolla

PLOS ONE

2017. Artikel. https://doi.org/10.1371/journal.pone.0179646 Open Access

Synaesthesia-type associations and perceptual changes induced by hypnotic suggestion

Sakari Kallio, Mika Koivisto, Johanna K. Kaakinen

Scientific Reports

2017. Artikel. https://doi.org/10.1038/s41598-017-16174-y Open Access

Variations in user-oriented elderly care: a multilevel approach

Ali Kazemi, Petri Kajonius

International Journal of Quality and Service Sciences

2017. Artikel. https://doi.org/10.1108/IJQSS-06-2016-0045 Open Access

TMS-EEG reveals hemispheric asymmetries in top-down influences of posterior intraparietal cortex on behavior and visual event-related potentials

Mika Koivisto, Simone Grassini, Mikko Hurme, Niina Salminen-Vaparanta, Henry Railo, Victor Vorobyev, Jussi Tallus, Teemu Paavilainen, Antti Revonsuo

Neuropsychologia

2017. Artikel. https://doi.org/10.1016/j.neuropsychologia.2017.11.012

Different Electrophysiological Correlates of Visual Awareness for Detection and Identification

Mika Koivisto, Simone Grassini, Niina Salminen-Vaparanta, Antti Revonsuo

Journal of cognitive neuroscience

2017. Artikel. https://doi.org/10.1162/jocn_a_01149

The diagnostic value of PCT as biomarker in patients suspected with community-onset bacterial sepsis

Lars Ljungström, Gunnar Jacobsson, Anna-Karin Pernestig, Diana Tilevik

European Congress of Clinical Microbiology and Infectious Diseases

2017. Konferensbidrag, poster.

Diagnostic accuracy of procalcitonin, neutrophil-lymphocyte count ratio, C-reactive protein, and lactate in patients with suspected bacterial sepsis

Lars Ljungström, Anna-Karin Pernestig, Gunnar Jacobsson, Rune Andersson, Barbara Usener, Diana Tilevik

PLOS ONE

2017. Artikel. https://doi.org/10.1371/journal.pone.0181704 Open Access

Redox-based therapeutics in neurodegenerative disease

G. J. McBean, M. G. López, Fredrik K. Wallner

British Journal of Pharmacology

2017. Artikel. https://doi.org/10.1111/bph.13551

Functional studies of AtACR2 gene putatively involved in accumulation, reduction and/or sequestration of arsenic species in plants

Noor Nahar, Aminur Rahman, Sibdas Ghosh, Neelu Nawani, Abul Mandal

Biologia

2017. Artikel. https://doi.org/10.1515/biolog-2017-0062

Phytoremediation of arsenic from the contaminated soil using transgenic tobacco plants expressing ACR2 gene of Arabidopsis thaliana

Noor Nahar, Aminur Rahman, Neelu N. Nawani, Sibdas Ghosh, Abul Mandal

Journal of plant physiology (Print)

2017. Artikel. https://doi.org/10.1016/j.jplph.2017.08.001

Nash equilibrium can resolve conflicting maximum sustainable yields in multi-species fisheries management

Niclas Norrström, Michele Casini, Noél M. A. Holmgren

ICES Journal of Marine Science

2017. Artikel. https://doi.org/10.1093/icesjms/fsw148 Open Access

Draft genome sequences of strains Salinicola socius SMB35T, Salinicola sp. MH3R3–1 and Chromohalobacter sp. SMB17 from the Verkhnekamsk potash mining region of Russia

Björn E. Olsson, Ekaterina S. Korsakova, Lyudmila N. Anan'ina, Anna A. Pyankova, Olga V. Mavrodi, Elena G. Plotnikova, Dmitri V. Mavrodi

Standards in Genomic Sciences

2017. Artikel. https://doi.org/10.1186/s40793-017-0251-5 Open Access

Report of the Baltic Fisheries Assessment Working Group (WGBFAS): 19-26 April 2017, Copenhagen, Denmark

Alessandro Orio, Anders Nielsen, Anna Luzenczyk, Casper Berg, Didzis Ustups, Dmitriy Artemenkov, Franziska Schade, Georgs Kornilovs, Henrik Degel, Harry Strehlow, Igor Karpushevskiy, Jan Horbowy, Jari Raitaniemi, Jesper Boje, Joakim Hjelm et al.

2017. Rapport. Open Access

Consciousness, semiosis, and the unbinding problem

Joel Parthemore

Language & Communication

2017. Artikel. https://doi.org/10.1016/j.langcom.2016.10.004

Understanding empathy: Metaphysical starting assumptions in the modeling of empathy and emotions

Joel Parthemore

Proceedings of AISB Annual Convention 2017: Society with AI

2017. Konferensbidrag.

Testing construct independence in the Short Dark Triad using Item Response Theory

Björn N. Persson, Petri J. Kajonius, Denilo Garcia

Personality and Individual Differences

2017. Artikel. https://doi.org/10.1016/j.paid.2017.05.025

Is there room in quantum ontology for a genuine causal role of consciousness?

Paavo Pylkkänen

The Palgrave Handbook of Quantum Models in Social Science: Applications and Grand Challenges

2017. Kapitel i bok. https://doi.org/10.1057/978-1-137-49276-0_14

The crisis of intelligibility in physics and the prospects of a new form of scientific rationality

Paavo Pylkkänen

On the Human Condition: Philosophical Essays in Honour of the Centennial Anniversary of Georg Henrik von Wright

2017. Kapitel i bok.

The role of Eastern approaches in David Bohm's scientific-philosophical odysseia

Paavo Pylkkänen

Progress in Biophysics and Molecular Biology

2017. Artikel. https://doi.org/10.1016/j.pbiomolbio.2017.08.015

Investigation on Arsenic-Accumulating and Arsenic-Transforming Bacteria for Potential Use in the Bioremediation of Arsenics

Aminur Rahman, Noor Nahar, Neelu N. Nawani, Abul Mandal

Handbook of Metal-Microbe Interactions and Bioremediation

2017. Kapitel i bok.

Genome Sequencing Revealed Chromium and Other Heavy Metal Resistance Genes in E. cloacae B2-Dha

Aminur Rahman, Björn Olsson, Jana Jass, Neelu Nawani, Sibdas Ghosh, Abul Mandal

Journal of Microbial & Biochemical Technology

2017. Artikel. https://doi.org/10.4172/1948-5948.1000365 Open Access

Expert validity on non-verbal personality characters

John Magnus Roos, Petri J. Kajonius

14th Conference on Psychological Assessment, July 5-8, 2017, Lisbon, Portugal: Book of Abstracts

2017. Konferensbidrag, muntlig presentation med abstract.

Identification and Characterization of Azo Dye Decolourizing Bacterial Strains, Alcaligenes faecalis E5.Cd and A. faecalis Fal.3 Isolated from Textile Effluents

Ananda Kumar Saha, Nahida Sultana, Moni Krishno Mohanta, Abul Mandal, Fazlul Haque

American Scientific Research Journal for Engineering, Technology, and Sciences (ASRJETS)

2017. Artikel. Open Access

Nightmares as predictors of suicide: an extension study including war veterans

Nils Sandman, Katja Valli, Erkki Kronholm, Erkki Vartiainen, Tiina Laatikainen, Tiina Paunio

Scientific Reports

2017. Artikel. https://doi.org/10.1038/srep44756 Open Access

Visual integration of multiple omics data from human pluripotent stem cell-derived cardiomyocytes

Peter Sartipy, Gustav Holmgren, Jane Synnergren, Christian Andersson, Anders Lindahl

International Society for Stem Cell Research (ISSCR) Annual meeting, Boston 14–17 June 2017

2017. Konferensbidrag, poster.

How You Measure Is What You Get: Differences in Self- and External Ratings of Emotional Experiences in Home Dreams

Pilleriin Sikka, Diana Feilhauer, Katja Valli, Antti Revonsuo

American Journal of Psychology

2017. Artikel. https://doi.org/10.5406/amerjpsyc.130.3.0367

CSF/serum albumin ratio in dementias: a cross-sectional study on 1861 patients

Tobias Skillbäck, Louise Delsing, Jane Synnergren, Niklas Mattsson, Shorena Janelidze, Katarina Nägga, Lena Kilander, Ryan Hicks, Anders Wimo, Bengt Winblad, Oskar Hansson, Kaj Blennow, Maria Eriksdotter, Henrik Zetterberg

Neurobiology of Aging

2017. Artikel. https://doi.org/10.1016/j.neurobiolaging.2017.06.028

Maintenance of drug metabolism and transport functions in human precision-cut liver slices during prolonged incubation for 5 days

Viktoriia Starokozhko, Suresh Vatakuti, Bauke H. Schievink, Marjolijn T. Merema, Annika Asplund, Jane Synnergren, Anders Aspegren, Geny M. M. Groothuis

Archives of Toxicology

2017. Artikel. https://doi.org/10.1007/s00204-016-1865-x Open Access

Evolution of the selfing syndrome: Anther orientation and herkogamy together determine reproductive assurance in a self-compatible plant

Per Toräng, Linus Vikström, Jörg Wunder, Stefan Wötzel, George Coupland, Jon Ågren

Evolution

2017. Artikel. https://doi.org/10.1111/evo.13308

A data analysis framework for biomedical big data: Application on mesoderm differentiation of human pluripotent stem cells

Benjamin Ulfenborg, Alexander Karlsson, Maria Riveiro, Caroline Améen, Karolina Åkesson, Christian X. Andersson, Peter Sartipy, Jane Synnergren

PLOS ONE

2017. Artikel. https://doi.org/10.1371/journal.pone.0179613 Open Access

Ny metod bedömer risk för bomullsmögel

Ann-Charlotte Wallenhammar, Maria Algerin, Diana Tilevik

Arvensis

2017. Artikel.

Cytokine correlation analysis based on drug perturbation

Fredrik K. Wallner, Malin Hultqvist Hopkins, Therese Lindvall, Peter Olofsson, Andreas Tilevik

Cytokine

2017. Artikel. https://doi.org/10.1016/j.cyto.2016.10.015

Sources of Metal Pollution, Global Status, and Conventional Bioremediation Practices

Priti Prabhakar Yewale, Aminur Rahman, Noor Nahar, Anandakumar Saha, Jana Jass, Abul Mandal, Neelu N. Nawani

Handbook of Metal–Microbe Interactions and Bioremediation

2017. Kapitel i bok.

One Standardized Differentiation Procedure Robustly Generates Homogenous Hepatocyte Cultures Displaying Metabolic Diversity from a Large Panel of Human Pluripotent Stem Cells

Annika Asplund, Arvind Pradip, Mariska van Giezen, Anders Aspegren, Helena Choukair, Marie Rehnström, Susanna Jacobsson, Nidal Ghosheh, Dorra El Hajjam, Sandra Holmgren, Susanna Larsson, Jörg Benecke, Mariela Butron, Annelie Wigander, Karin Noaksson et al.

Stem Cell Reviews

2016. Artikel. https://doi.org/10.1007/s12015-015-9621-9

Interim Report of the ICES/HELCOM Working Group on Integrated Assessments of the Baltic Sea (WGIAB): 18-22 April 2016 Helsinki, Finland

Lena Bergström, Thorsten Blenckner, Romain Frelat, Anders Grimvall, Päivi Haapasaari, Bianca Haas, Outi Heikinheimo, Susanna Jernberg, Scott Large, Martin Lindegren, Phil Levin, Annukka Lehikoinen, Christian Möllmann, Marie Nordström, Niclas Norrström et al.

2016. Rapport.

Highly Synchronized Expression of Lineage-Specific Genes during In Vitro Hepatic Differentiation of Human Pluripotent Stem Cell Lines

Nidal Ghosheh, Björn Olsson, Josefina Edsbagge, Barbara Küppers-Munther, Mariska Van Giezen, Annika Asplund, Tommy B. Andersson, Petter Björquist, Helena Carén, Stina Simonsson, Peter Sartipy, Jane Synnergren

Stem Cells International

2016. Artikel. https://doi.org/10.1155/2016/8648356 Open Access

The Relationship between Mind-Body Dualism and Personal Values

Gunne Grankvist, Petri Kajonius, Björn Persson

International Journal of Psychological Studies

2016. Artikel. https://doi.org/10.5539/ijps.v8n2p126 Open Access

Report of the Workshop on DEveloping Integrated AdviCE for Baltic Sea ecosystem-based fisheries management (WKDEICE): 18-21 April 2016 Helsinki, Finland

Hans-Harald Hinrichsen, Scott Large, Christian Möllmann, Bärbel Müller-Karulis, Stefan Neuenfeldt, Niclas Norrström, Jörn Schmidt, Camilla Sguotti, Maciej Tomczak, Rudi Voss, Henrik Hamrén

2016. Rapport.

In vitro toxicity testing using human pluripotent stem cell derivatives

Gustav Holmgren

2016. Doktorsavhandling. Open Access

MicroRNAs as potential biomarkers for doxorubicin-induced cardiotoxicity

Gustav Holmgren, Jane Synnergren, Christian X. Andersson, Anders Lindahl, Peter Sartipy

Toxicology in Vitro

2016. Artikel. https://doi.org/10.1016/j.tiv.2016.03.009

Report of the Working Group on Multispecies Assessment Methods (WGSAM), 9–13 November 2015, Woods Hole, USA

Daniel Howell, Steve Mackinson, Alexander Kempf, Anna Rindorf, Andrea Belgrano, Robert Thorpe, Morten Vinther, Valerio Bartolino, John Pope, Alfonso Perez Rodriguez, Clement Garcia, Sigrid Lehuta, Isaac Kaplan, Sarah Gaichas, Curti Kiersten et al.

2016. Rapport. Open Access

Improvement of animal welfare by strategic analysis and logistic optimisation of animal slaughter transportation

Nina Håkansson, P. Flisberg, B. Algers, Annie Jonsson, M. Rönnqvist, U. Wennergren

Animal Welfare

2016. Artikel. https://doi.org/10.7120/09627286.25.2.255

Ökad biologisk mångfald och renare vatten med livskraftiga stormusselbestånd i Göta älvs vattensystem: Dagens situation och åtgärder för att minska vattenkraftens negativa påverkan

Annie Jonsson, Ann Bertilsson

2016. Rapport.

Towards Creating the Perfect In Vitro Cell Model

Malin K. B. Jonsson, Toon A. B. van Veen, Jane Synnergren, Bruno Becker

Stem Cells International

2016. Artikel, editorial. https://doi.org/10.1155/2016/3459730 Open Access

Verification of microRNA expression in human endometrial adenocarcinoma

Sanja Jurcevic, Karin Klinga-Levan, Björn Olsson, Katarina Ejeskär

BMC Cancer

2016. Artikel. https://doi.org/10.1186/s12885-016-2296-z Open Access

Role of Silicon Counteracting Cadmium Toxicity in Alfalfa (Medicago sativa L.)

Ahmad H. Kabir, Mohammad M. Hossain, Most A. Khatun, Abul Mandal, Syed A. Haider

Frontiers in Plant Science

2016. Artikel. https://doi.org/10.3389/fpls.2016.01117 Open Access

Honesty-Humility predicting self-estimated academic performance

Petri J. Kajonius

International Journal of Personality Psychology

2016. Artikel.

The (mis)measurement of the Dark Triad Dirty Dozen: exploitation at the core of the scale

Petri J. Kajonius, Björn N. Persson, Patricia Rosenberg, Danilo Garcia

PeerJ

2016. Artikel. https://doi.org/10.7717/peerj.1748 Open Access

Seeing Blue As Red: A Hypnotic Suggestion Can Alter Visual Awareness of Colors

Sakari Kallio, Mika Koivisto

International journal of clinical and experimental hypnosis

2016. Artikel. https://doi.org/10.1080/00207144.2016.1171088

Truncating CHRNG mutations associated with interfamilial variability of the severity of the Escobar variant of multiple pterygium syndrome

Ariana Kariminejad, Navid Almadani, Atefeh Khoshaeen, Björn Olsson, Ali-Reza Moslemi, Homa Tajsharghi

BMC Genetics

2016. Artikel. https://doi.org/10.1186/s12863-016-0382-5 Open Access

Cost and satisfaction trends in Swedish elderly home care

Ali Kazemi, Petri J. Kajonius

Home Health Care Management & Practice

2016. Artikel. https://doi.org/10.1177/1084822316646353 Open Access

Subjective visual awareness emerges prior to P3

Mika Koivisto, Niina Salminen-Vaparanta, Simone Grassini, Antti Revonsuo

European Journal of Neuroscience

2016. Artikel. https://doi.org/10.1111/ejn.13264

Status of metal pollution in rivers flowing through urban settlements at Pune and its effect on resident microflora

Neelu Nawani, Aminur Rahman, Noor Nahar, Anandakumar Saha, Balasaheb Kapadnis, Abul Mandal

Biologia

2016. Artikel. https://doi.org/10.1515/biolog-2016-0074

A cognitive semiotic perspective on the nature and limitations of concepts and conceptual frameworks

Joel Parthemore

Meaning, Mind and Communication: Explorations in Cognitive Semiotics

2016. Kapitel i bok. https://doi.org/10.3726/978-3-653-04948-0

Dark and bright values: The Dark Triad and empathy relating to universal values

Björn N. Persson, Petri J. Kajonius

2nd World Conference on Personality Psychology, March 31 to April 4, 2016, Búzios, Brazil

2016. Konferensbidrag, muntlig presentation med abstract. Open Access

Dark values: The dark triad in Schwartz’ value types

Björn N. Persson, Petri J. Kajonius

Independent in the heard: Inclusion and exclusion as social processes: Proceedings from the 9th GRASP conference, Linköping University, May 2014

2016. Kapitel i bok. Open Access

Empathy and Universal Values Explicated by the Empathy-Altruism Hypothesis

Björn N. Persson, Petri J. Kajonius

Journal of Social Psychology

2016. Artikel. https://doi.org/10.1080/00224545.2016.1152212

High Content Analysis of Human Pluripotent Stem Cell Derived Hepatocytes Reveals Drug Induced Steatosis and Phospholipidosis

Arvind Pradip, Daniella Steel, Susanna Jacobsson, Gustav Holmgren, Magnus Ingelman-Sundberg, Peter Sartipy, Petter Björquist, Inger Johansson, Josefina Edsbagge

Stem Cells International

2016. Artikel. https://doi.org/10.1155/2016/2475631 Open Access

Can Bohmian Quantum Information Help us to Understand Consciousness?

Paavo Pylkkänen

Quantum Interaction: 9th International Conference, QI 2015, Filzbach, Switzerland, July 15-17, 2015, Revised Selected Papers

2016. Kapitel i bok. https://doi.org/10.1007/978-3-319-28675-4_6

Consciousness in the light of quantum theory

Paavo Pylkkänen

Consciousness: Integrating Eastern and Western Perspectives

2016. Kapitel i bok.

Bioremediation of Toxic Metals for Protecting Human Health and the Ecosystem

Aminur Rahman

2016. Doktorsavhandling.

Complete genome sequence of Lysinibacillus sphaericus B1-CDA: a bacterium that accumulates arsenics

Aminur Rahman, Noor Nahar, Jana Jass, Björn Olsson, Abul Mandal

Genome Announcements

2016. Artikel. https://doi.org/10.1128/genomeA.00999-15 Open Access

Complete Genome Sequence of Enterobacter cloacae B2-DHA: a Chromium-Resistant Bacterium

Aminur Rahman, Noor Nahar, Björn Olsson, Abul Mandal

Genome Announcements

2016. Artikel. https://doi.org/10.1128/genomeA.00483-16 Open Access

The Avatars in the Machine: Dreaming as a Simulation of Social Reality

Antti Revonsuo, Jarno Tuominen, Katja Valli

Open MIND: Philosophy and the Mind Sciences in the 21st Century

2016. Kapitel i bok. https://doi.org/10.15502/9783958570375 Open Access

The Simulation Theories of Dreaming: How to Make Theoretical Progress in Dream Science

Antti Revonsuo, Jarno Tuominen, Katja Valli

Open MIND: Philosophy and the Mind Sciences in the 21st Century

2016. Kapitel i bok. https://doi.org/10.15502/9783958570894 Open Access

Gene Co-Expression Network Analysis for Identifying Modules and Functionally Enriched Pathways in Type 1 Diabetes

Ignacio Riquelme Medina, Zelmina Lubovac-Pilav

PLOS ONE

2016. Artikel. https://doi.org/10.1371/journal.pone.0156006 Open Access

Interactive visualization of large-scale gene expression data

Maria Riveiro, Mikael Lebram, Christian X. Andersson, Peter Sartipy, Jane Synnergren

Information Visualisation: Computer Graphics, Imaging and Visualisation

2016. Konferensbidrag. https://doi.org/10.1109/IV.2016.58

Use of N,N-diacetylchitobiose in decreasing toxic effects of indoor air pollution by preventing oxidative DNA damage

Neeta A. Salgaonkar, Prasad M. Thakare, Manisha V. Junnarkar, Balasaheb P. Kapadnis, Abul Mandal, Cecilia Eriksson, Nawani N. Neelu

Biologia

2016. Artikel. https://doi.org/10.1515/biolog-2016-0075

Winter is coming: nightmares and sleep problems during seasonal affective disorder

Nils Sandman, Ilona Merikanto, Hanna Määttänen, Katja Valli, Erkki Kronholm, Tiina Laatikainen, Timo Partonen, Tiina Paunio

Journal of Sleep Research

2016. Artikel. https://doi.org/10.1111/jsr.12416 Open Access

Methodological Issues in Measuring Dream Emotions

Pilleriin Sikka, Antti Revonsuo, Katja Valli

The 33rd Annual International Dream Conference (organized by the International Association for the Study of Dreams), Kerkrade, the Netherlands, June 24-28, 2016

2016. Konferensbidrag, muntlig presentation med abstract.

Transcriptional profiling of human embryonic stem cells during mesodermal- and cardiac differentiation

Jane Marie Synnergren, Caroline Améen, Karolina Åkesson, Alexander Karlsson, Maria Riveiro, Christian X. Andersson, Peter Sartipy

International Society for Stem Cell Research (ISSCR) Annual meeting, San Fransisco 22–25 June 2016

2016. Konferensbidrag, poster.

Comparative transcriptomic analysis identifies genes differentially expressed in human epicardial progenitors and hiPSC-derived cardiac progenitors

Jane Synnergren, Lauren Drowley, Alleyn T. Plowright, Gabriella Brolén, Marie-Josè Goumans, Adriana C. Gittenberger-de Groot, Peter Sartipy, Qing-Dong Wang

Physiological Genomics

2016. Artikel. https://doi.org/10.1152/physiolgenomics.00064.2016 Open Access

Bioinformatics tools for discovery and evaluation of biomarkers: Applications in clinical assessment of cancer

Benjamin Ulfenborg

2016. Doktorsavhandling.

Dreams

Katja Valli

The SAGE Encyclopedia of Theory in Psychology

2016. Kapitel i bok. https://doi.org/10.4135/9781483346274.n81

Lowered Expression of Tumor Suppressor Candidate MYO1C Stimulates Cell Proliferation, Suppresses Cell Adhesion and Activates AKT

Kittichate Visuttijai, Jennifer Pettersson, Yashar Mehrbani Azar, Iman van den Bout, Charlotte Örndal, Janusz Marcickiewicz, Staffan Nilsson, Michael Hörnquist, Björn Olsson, Katarina Ejeskär, Afrouz Behboudi

PLOS ONE

2016. Artikel. https://doi.org/10.1371/journal.pone.0164063 Open Access

Defining the reference situation for biodiversity in Life Cycle Assessments: Review and recommendations

Emke Vrasdonk, Ulrika Palme, Tommy Lennartsson, Alexandre Antonelli, Sofia Berg, Annie Jonsson, Christel Cederberg

10th International Conference on Life Cycle Assessment of Food, Dublin, 19-21 October 2016

2016. Konferensbidrag.

Report of the Benchmark Workshop on Baltic Cod Stocks (WKBALTCOD)

Gustaf Almqvist, Michael Andersen, Casper Willestofte Berg, Wendy Broadgate, Meaghan Bryan, Steven Campana, Max Cardinale, Michele Casini, Jan Dierking, Christian von Dorrien, Margit Eero, Yuri Efimov, Pavel Gasyukov, Jakob Hemmer-Hansen, Joakim Hjelm et al.

2015. Rapport. Open Access

Increasing Societal Well-Being Through Enhanced Empathy Using Computer Games

Judith Annett, Stefan Berglund

Well-Being in Contemporary Society

2015. Kapitel i bok. https://doi.org/10.1007/978-3-319-06459-8_8

Ecological communities are vulnerable to realistic extinction sequences

Sofia Berg, Aexander Pimenov, Catherine Palmer, Mark Emmerson, Tomas Jonsson

Oikos

2015. Artikel. https://doi.org/10.1111/oik.01279

Report of the Baltic Fisheries Assessment Working Group (WGBFAS): 14-21 April 2015, ICES HQ, Copenhagen, Denmark

Mikaela Bergenius, Jesper Boje, Michele Casini, Henrik Degel, Margit Eero, Ann-Britt Florin, Pavel Gasyukov, Wlodzimierz Grygiel, Tomas Gröhsler, Joakim Hjelm, Jan Horbowy, Noél Holmgren, Niclas Norrström, Olavi Kaljuste, Igor Karpushevskiy et al.

2015. Rapport. Open Access

Report of the ICES/HELCOM Working Group on Integrated Assessments of the Baltic Sea (WGIAB)

Lena Bergström, Thorsten Blenckner, Anders Grimvall, Anna Gårdmark, Henrik Hamrén, Noél Holmgren, Ute Jacob, Stuart Kininmonth, Scott Large, Phil Levin, Annukka Lehikoinen, Marcos Llope, Anna Luzenczyk, Bärbel Müller-Karulis, Christian Möllmann et al.

2015. Rapport. Open Access

Eastern Baltic cod in distress: biological changes and challenges for stock assessment

Margit Eero, Joakim Hjelm, Jane Behrens, Kurt Buchmann, Massimiliano Cardinale, Michele Casini, Pavel Gasyukov, Noél Holmgren, Jan Horbowy, Karin Hüssy, Eskil Kirkegaard, Georgs Kornilovs, Uwe Krumme, Friedrich W. Köster, Rainer Oeberst et al.

ICES Journal of Marine Science

2015. Artikel. https://doi.org/10.1093/icesjms/fsv109 Open Access

Expression of miRNAs in Bull Spermatozoa Correlates with Fertility Rates

Magnus Fagerlind, Hans Stålhammar, Björn Olsson, Karin Klinga-Levan

Reproduction in domestic animals

2015. Artikel. https://doi.org/10.1111/rda.12531

Gene networks and transcription factor motifs defining the differentiation of stem cells into hepatocyte-like cells

Patricio Godoy, Wolfgang Schmidt-Heck, Karthick Natarajan, Baltasar Lucendo-Villarin, Dagmara Szkolnicka, Annika Asplund, Petter Björquist, Agata Widera, Regina Stöber, Gisela Campos, Seddik Hammad, Agapios Sachinidis, Umesh Chaudhari, Georg Damm, Thomas S. Weiss et al.

Journal of Hepatology

2015. Artikel. https://doi.org/10.1016/j.jhep.2015.05.013 Open Access

Identification of stable reference genes in differentiating human pluripotent stem cells

Gustav Holmgren, Nidal Ghosheh, Xianmin Zeng, Yalda Bogestål, Peter Sartipy, Jane Synnergren

Physiological Genomics

2015. Artikel. https://doi.org/10.1152/physiolgenomics.00130.2014

Identification of novel biomarkers for doxorubicin-induced toxicity in human cardiomyocytes derived from pluripotent stem cells

Gustav Holmgren, Jane Synnergren, Yalda Bogestål, Caroline Améen, Karolina Åkesson, Sandra Holmgren, Anders Lindahl, Peter Sartipy

Toxicology

2015. Artikel. https://doi.org/10.1016/j.tox.2014.12.018 Open Access

Elevated concentrations of serum matrix metalloproteinase-2 and -9 and their associations with circulating markers of cardiovascular diseases in chronic arsenic-exposed individuals

Md Shofikul Islam, Nayan Chandra Mohanto, Md Rezaul Karim, Sharmin Aktar, Md Mominul Hoque, Atiqur Rahman, Momotaj Jahan, Rabeya Khatun, Abdul Aziz, Kazi Abdus Salam, Zahangir Alam Saud, Mostaque Hossain, Aminur Rahman, Abul Mandal, Azizul Haque et al.

Environmental Health

2015. Artikel. https://doi.org/10.1186/s12940-015-0079-7 Open Access

The context dependency of species keystone status during food web disassembly

Tomas Jonsson, Sofia Berg, Mark Emmerson, Alexander Pimenov

Food Webs

2015. Artikel. https://doi.org/10.1016/j.fooweb.2015.07.002

The reliability of R50 as a measure of vulnerability of food webs to sequential species deletions

Tomas Jonsson, Sofia Berg, Alexander Pimenov, Catherine Palmer, Mark Emmerson

Oikos

2015. Artikel. https://doi.org/10.1111/oik.01588

A freshwater predator hit twice by effects of warming across trophic levels

Tomas Jonsson, Malin Setzer

Nature Communications

2015. Artikel. https://doi.org/10.1038/ncomms6992 Open Access

Hedonism, Achievement, and Power: Universal Values that Characterize the Dark Triad

Petri J. Kajonius, Björn N. Persson, Peter K. Jonason

Personality and Individual Differences

2015. Artikel. https://doi.org/10.1016/j.paid.2014.12.055

Non-Invasive Acoustical sensing of Drug-Induced Effects on the Contractile Machinery of Human Cardiomyocyte Clusters

Angelika Kunze, Daniella Steel, Kerstin Dahlenborg, Peter Sartipy, Sofia Svedhem

PLOS ONE

2015. Artikel. https://doi.org/10.1371/journal.pone.0125540 Open Access

Comparative Transcriptomics of Sijung and Jumli Marshi Rice during Early Chilling Stress Imply Multiple Protective Mechanisms

Angelica Lindlöf, Aakash Chawade, Per Sikora, Olof Olsson

PLOS ONE

2015. Artikel. https://doi.org/10.1371/journal.pone.0125385 Open Access

Trivial Love

Oskar MacGregor

Cambridge Quarterly of Healthcare Ethics

2015. Artikel. https://doi.org/10.1017/S0963180115000171

WADA's Whereabouts Requirements and Privacy

Oskar MacGregor

Routledge Handbook of Drugs and Sport

2015. Kapitel i bok.

Transgenic tobacco plants expressing ACR2 gene of Arabidopsis thaliana exhibit reduced accumulation of arsenics and increased tolerance to arsenate

Abul Mandal

Transgenic tobacco plants expressing ACR2 gene of Arabidopsis thaliana exhibit reduced accumulation of arsenics and increased tolerance to arsenate

2015. Konferensbidrag, muntlig presentation med abstract. https://doi.org/10.4172/2329-955X.C1.002 Open Access

Fundamental Physics and the Mind – Is There a Connection?

Paavo Pylkkänen

Quantum Interaction 2014: 8th International Conference, QI 2014, Filzbach, Switzerland, June 30 - July 3, 2014. Revised Selected Papers

2015. Kapitel i bok. https://doi.org/10.1007/978-3-319-15931-7_1

Quantum theory, active information and the mind-matter problem

Paavo Pylkkänen

Contextuality from Quantum Physics to Psychology

2015. Kapitel i bok.

The quantum epoché

Paavo Pylkkänen

Progress in Biophysics and Molecular Biology

2015. Artikel. https://doi.org/10.1016/j.pbiomolbio.2015.08.014

Weak vs. Strong Quantum Cognition

Paavo Pylkkänen

Advances in Cognitive Neurodynamics (IV): Proceedings of the Fourth International Conference on Cognitive Neurodynamics - 2013

2015. Kapitel i bok. https://doi.org/10.1007/978-94-017-9548-7_58

Bohm's approach and individuality

Paavo Pylkkänen, Basil Hiley, Ilkka Pättiniemi

Individuals Across the Sciences

2015. Kapitel i bok. https://doi.org/10.1093/acprof:oso/9780199382514.003.0013

Comparative genome analysis of Lysinibacillus B1-CDA, a bacterium that accumulates arsenics

Aminur Rahman, Noor Nahar, Neelu N. Nawani, Jana Jass, Sibdas Ghosh, Björn Olsson, Abul Mandal

Genomics

2015. Artikel. https://doi.org/10.1016/j.ygeno.2015.09.006

Data in support of the comparative genome analysis of Lysinibacillus B1-CDA, a bacterium that accumulates arsenics

Aminur Rahman, Noor Nahar, Neelu N. Nawani, Jana Jass, Sibdas Ghosh, Björn Olsson, Abul Mandal

Data in Brief

2015. Artikel. https://doi.org/10.1016/j.dib.2015.09.040 Open Access

Bioremediation of hexavalent chromium (VI) by a soil borne bacterium, Enterobacter cloacae B2-DHA

Aminur Rahman, Noor Nahar, Neelu N. Nawani, Jana Jass, Khaled Hossain, Zahangir Alam Saud, Ananda K. Saha, Sibdas Ghosh, Björn Olsson, Abul Mandal

Journal of Environmental Science and Health. Part A

2015. Artikel. https://doi.org/10.1080/10934529.2015.1047670

Behavioral and electrophysiological evidence for fast emergence of visual consciousness

Henry Railo, Antti Revonsuo, Mika Koivisto

Neuroscience of Consciousness

2015. Artikel. https://doi.org/10.1093/nc/niv004 Open Access

Hard to See the Problem?

Antti Revonsuo

Journal of consciousness studies

2015. Artikel.

The future of consciousness science: From empirical correlations to theoretical explanation

Antti Revonsuo

The Constitution of Phenomenal Consciousness: Toward a science and theory

2015. Kapitel i bok. https://doi.org/10.1075/aicr.92.10rev

Nightmares: Risk factors among the Finnish general adult population

Nils Sandman, Katja Valli, Erkki Kronholm, Antti Revonsuo, Tiina Laatikainen, Tiina Paunio

Sleep

2015. Artikel. https://doi.org/10.5665/sleep.4560

A novel pairwise comparison method for in silico discovery of statistically significant cis-regulatory elements in eukaryotic promoter regions: Application to Arabidopsis: Application to Arabidopsis

Roohollah Shamloo-Dashtpagerdi, Hooman Razi, Massumeh Aliakbari, Angelica Lindlöf, Mahdi Ebrahimi, Esmaeil Ebrahimie

Journal of Theoretical Biology

2015. Artikel. https://doi.org/10.1016/j.jtbi.2014.09.038

Draft Genome Sequence of Rhodococcus ruber Strain P25: an Active Polychlorinated Biphenyl Degrader

Ekaterina Shumkova, Björn Olsson, Anna Kudryavtseva, Elena Plotnikova

Genome Announcements

2015. Artikel. https://doi.org/10.1128/genomeA.00990-15 Open Access

Organization of Biphenyl and Polychlorinated Biphenyls Destruction Genes in Rhodococcus ruber P25

E. S. Shumkova, Björn E. Olsson, E. G. Plotnikova

Russian Journal of Immunology

2015. Artikel, meeting abstract.

miREC: a database of miRNAs involved in the development of endometrial cancer

Benjamin Ulfenborg, Sanja Jurcevic, Angelica Lindelöf, Karin Klinga-Levan, Björn Olsson

BMC Research Notes

2015. Artikel. https://doi.org/10.1186/s13104-015-1052-9 Open Access

Genome-wide discovery of miRNAs using ensembles of machine learning algorithms and logistic regression

Benjamin Ulfenborg, Karin Klinga-Levan, Björn Olsson

International Journal of Data Mining and Bioinformatics

2015. Artikel. https://doi.org/10.1504/IJDMB.2015.072755

Dreaming furiously?: A sleep laboratory study on the dream content of people with Parkinson's disease and with or without rapid eye movement sleep behavior disorder

Katja Valli, Birgit Frauscher, Taina Peltomaa, Viola Gschliesser, Antti Revonsuo, Birgit Högl

Sleep Medicine

2015. Artikel. https://doi.org/10.1016/j.sleep.2014.10.014

The impact of hypnotic suggestions on reaction times in continuous performance test in adults with ADHD and healthy controls

Maarit Virta, Seppo Hiltunen, Markus Mattsson, Sakari Kallio

PLOS ONE

2015. Artikel. https://doi.org/10.1371/journal.pone.0126497 Open Access

The Use of Visual Cues to Determine the Intent of Cyclists in Traffic

Paul Hemeren, Mikael Johannesson, Mikael Lebram, Fredrik Eriksson, Kristoffer Ekman, Peter Veto

2014 IEEE International Inter-Disciplinary Conference on Cognitive Methods in Situation Awareness and Decision Support (CogSIMA)

2014. Konferensbidrag. https://doi.org/10.1109/CogSIMA.2014.6816539

Long-term chronic toxicity testing using human pluripotent stem cell-derived hepatocytes

Gustav Holmgren, Anna-Karin Sjögren, Isabel Barragan, Alan Sabirsh, Peter Sartipy, Jane Synnergren, Petter Björquist, Magnus Ingelman-Sundberg, Tommy B. Andersson, Josefina Edsbagge

Drug Metabolism And Disposition

2014. Artikel. https://doi.org/10.1124/dmd.114.059154

MicroRNA expression in human endometrial adenocarcinoma

Sanja Jurcevic, Björn Olsson, Karin Klinga-Levan

Cancer Cell International

2014. Artikel. https://doi.org/10.1186/s12935-014-0088-6 Open Access

Recurrent processing enhances visual awareness but is not necessary for fast categorization of natural scenes

Mika Koivisto, Granit Kastrati, Antti Revonsuo

Journal of cognitive neuroscience

2014. Artikel. https://doi.org/10.1162/jocn_a_00486

Harnessing anaesthesia and brain imaging for the study of human consciousness

Jaakko W. Långsjö, Antti Revonsuo, Harry Scheinin

Current pharmaceutical design

2014. Artikel.

Can quantum analogies help us to understand the process of thought?

Paavo Pylkkänen

Mind and Matter

2014. Artikel.

Isolation and characterization of a Lysinibacillus strain B1-CDA showing potential for bioremediation of arsenics from contaminated water

Aminur Rahman, Noor Nahar, Neelu N. Nawani, Jana Jass, Prithviraj Desale, Balu P. Kapadnis, Khaled Hossain, Ananda K. Saha, Sibdas Ghosh, Björn Olsson, Abul Mandal

Journal of Environmental Science and Health. Part A

2014. Artikel. https://doi.org/10.1080/10934529.2014.928247

Subjective characteristics of TMS-induced phosphenes originating in human V1 and V2

Niina Salminen-Vaparanta, Simo Vanni, Valdas Noreika, Vladas Valiulis, Levente Moro, Antti Revonsuo

Cerebral Cortex

2014. Artikel. https://doi.org/10.1093/cercor/bht131

Employment of the Triple Helix concept for development of regenerative medicine applications based on human pluripotent stem cells

Peter Sartipy, Petter Björquist

Clinical and translational medicine

2014. Artikel, forskningsöversikt. https://doi.org/10.1186/2001-1326-3-9 Open Access

I know how you felt last night, or do I?: Self- and external ratings of emotions in REM dreams

Pilleriin Sikka, Katja Valli, Tiina Virta, Antti Revonsuo

Consciousness and Cognition

2014. Artikel. https://doi.org/10.1016/j.concog.2014.01.011

Clinical Outcome 3 Years After Autologous Chondrocyte Implantation Does Not Correlate With the Expression of a Predefined Gene Marker Set in Chondrocytes Prior to Implantation but Is Associated With Critical Signaling Pathways

Johan Stenberg, Tommy S. de Windt, Jane Synnergren, Lars Hynsjö, Josefine van der Lee, Daniel B. F. Saris, Mats Brittberg, Lars Peterson, Anders Lindahl

The Orthopaedic Journal of Sports Medicine

2014. Artikel. https://doi.org/10.1177/2325967114550781 Open Access

Report of the Baltic Fisheries Assessment Working Group (WGBFAS), 3-10 April 2014, ICES HQ, Copenhagen, Denmark

Marie Storr-Paulsen, Albert Anu, Timo Arula, Jesper Boje, Michele Casini, Henrik Degel, Margit Eero, Pavel Gasyukov, Tomas Gröhsler, Joakim Hjelm, Jan Horbowy, Noél Holmgren, Stanislovas Jonusas, Olavi Kaljuste, Anastasiia Karpushevskaia et al.

2014. Rapport. Open Access

Effects of interleukin-6 and interleukin-1β on expression of growth differentiation factor-5 and Wnt signaling pathway genes in equine chondrocytes

Emilia Svala, Anna I. Thorfve, Cecilia Ley, Helena K. Barreto Henriksson, Jane M. Synnergren, Anders H. Lindahl, Stina Ekman, Eva S. R. Skiöldebrand

American Journal of Veterinary Research

2014. Artikel. https://doi.org/10.2460/ajvr.75.2.132

Explore transcription factor profiles in human pluripotent stem cells

Jane Synnergren

6th International Conference on Bioinformatics and Computational Biology (BICoB 2014): Las Vegas, Nevada, USA, 24 – 26 March 2014

2014. Konferensbidrag.

GenoScan: Genomic Scanner for Putative miRNA Precursors

Benjamin Ulfenborg, Karin Klinga-Levan, Björn Olsson

Bioinformatics Research and Applications: 10th International Symposium, ISBRA 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings

2014. Konferensbidrag. https://doi.org/10.1007/978-3-319-08171-7_24

A systems biology view of the spliceosome component Phf5a in relation to estrogen and cancer

Rishu Vallabhu, Eva Falck, Angelica Lindlöf

Journal of Computer Science and Systems Biology

2014. Artikel. https://doi.org/10.4172/jcsb.1000156 Open Access

Differences in microRNA expression during tumor development in the transition and peripheral zones of the prostate

Jessica Carlsson, Gisela Helenius, Mats G. Karlsson, Ove Andrén, Karin Klinga-Levan, Björn Olsson

BMC Cancer

2013. Artikel. https://doi.org/10.1186/1471-2407-13-362 Open Access

Addressing catch mechanisms in gillnets improves modeling of selectivity and estimates of mortality rates: a case study using survey data on an endangered stock of Arctic char

Tomas Jonsson, Malin Setzer, John G. Pope, Alfred Sandstrom

Canadian Journal of Fisheries and Aquatic Sciences

2013. Artikel. https://doi.org/10.1139/cjfas-2012-0472

Validation of Suitable Endogenous Control Genes for Quantitative PCR Analysis of microRNA gene expression in a rat model of endometrial cancer

Sanja Jurcevic, Björn Olsson, Karin Klinga-Levan

Cancer Cell International

2013. Artikel. https://doi.org/10.1186/1475-2867-13-45 Open Access

Classification of tumor samples from expression data using decision trunks

Benjamin Ulfenborg, Karin Klinga-Levan, Björn Olsson

Cancer Informatics

2013. Artikel. https://doi.org/10.4137/CIN.S10356 Open Access

Comparison of human cardiac gene expression profiles in paired samples of right atrium and left ventricle collected in vivo

Julia Asp, Jane Synnergren, Marianne Jonsson, Goran Dellgren, Anders Jeppsson

Physiological Genomics

2012. Artikel. https://doi.org/10.1152/physiolgenomics.00137.2011

Unconscious response priming by shape depends on geniculostriate visual projection

Mika Koivisto, Linda Henriksson, Antti Revonsuo, Henry Railo

European Journal of Neuroscience

2012. Artikel. https://doi.org/10.1111/j.1460-9568.2011.07973.x

Integrative Approach for Detection of Functional Modules from Protein-Protein Interaction Networks

Zelmina Lubovac-Pilav

Protein-Protein Interactions: Computational and Experimental Tools

2012. Kapitel i bok. https://doi.org/10.5772/37858 Open Access

Returning from Oblivion: Imaging the Neural Core of Consciousness

Jaakko W. Långsjö, Michael T. Alkire, Kimmo Kaskinoro, Hiroki Hayama, Anu Maksimow, Kaike K. Kaisti, Sargo Aalto, Riku Aantaa, Satu K. Jääskeläinen, Antti Revonsuo, Harry Scheinin

Journal of Neuroscience

2012. Artikel. https://doi.org/10.1523/JNEUROSCI.4962-11.2012

A Trade-off between Broad and Specific Ideas of Neural Self-Other Overlap

India Morrison

Emotion Review

2012. Artikel. https://doi.org/10.1177/1754073911421392

Perception of Short Time Scale Intervals in a Hypnotic Virtuoso

Valdas Noreika, Christine M. Falter, Valtteri Arstila, John H. Wearden, Sakari Kallio

International journal of clinical and experimental hypnosis

2012. Artikel. https://doi.org/10.1080/00207144.2012.675296

Predation av fisk och signalkräfta på rödingrom - resultat från en fältstudie i Vättern

Per Nyberg, Erik Degerman, Malin Setzer, Johnny Norrgård, Tomas Jonsson

2012. Rapport.

Cognition, the implicate order and rainforest realism

Paavo Pylkkänen

Futura

2012. Artikel.

Unconscious and Conscious Processing of Color Rely on Activity in Early Visual Cortex: A TMS Study

Henry Railo, Niina Salminen-Vaparanta, Linda Henriksson, Antti Revonsuo, Mika Koivisto

Journal of cognitive neuroscience

2012. Artikel. https://doi.org/10.1162/jocn_a_00172

Neuronavigated transcranial magnetic stimulation suggests that area V2 is necessary for visual awareness

Niina Salminen-Vaparanta, Mika Koivisto, Valdas Noreika, Simo Vanni, Antti Revonsuo

Neuropsychologia

2012. Artikel. https://doi.org/10.1016/j.neuropsychologia.2012.03.015

Is selective primary visual cortex stimulation achievable with TMS?

Niina Salminen-Vaparanta, Valdas Noreika, Antti Revonsuo, Mika Koivisto, Simo Vanni

Human Brain Mapping

2012. Artikel. https://doi.org/10.1002/hbm.21237

MicroRNA regulatory network involved in impaired functionality in cardiomyocytes derived from human embryonic stem cells

Jane Synnergren

25th International Conference on Computer Applications in Industry and Engineering 2012 (CAINE-2012) Held with the 4th International Symposium on Sensor Network and Application (SNA-2012): New Orleans, Louisiana, USA 14-16 November 2012

2012. Konferensbidrag.

Can observers link dream content to behaviours in rapid eye movement sleep behaviour disorder?: A cross-sectional experimental pilot study

Katja Valli, Birgit Frauscher, Viola Gschliesser, Elisabeth Wolf, Tina Falkenstetter, Suzana V. Schönwald, Laura Ehrmann, Anja Zangerl, Isabelle Marti, Sylvia M. Boesch, Antti Revonsuo, Werner Poewe, Birgit Högl

Journal of Sleep Research

2012. Artikel. https://doi.org/10.1111/j.1365-2869.2011.00938.x

The Role of Body Size in Complex Food Webs: A Cold Case

Ute Jacob, Aaron Thierry, Ulrich Brose, Wofe E. Arntz, Sofia Berg, Thomas Brey, Ingo Fetzer, Tomas Jonsson, Katja Mintenbeck, Christian Möllmann, Owen Petchey, Jens O. Riede, Jennifer A. Dunne

Advances in Ecological Research

2011. Artikel. https://doi.org/10.1016/B978-0-12-386475-8.00005-8

How to assess ictal consciousness?

Mirja Johanson, Katja Valli, Antti Revonsuo

Behavioural Neurology

2011. Artikel. https://doi.org/10.3233/BEN-2011-0316 Open Access

The Existence of a Hypnotic State Revealed by Eye Movements

Sakari Kallio, Jukka Hyönä, Antti Revonsuo, Pilleriin Sikka, Lauri Nummenmaa

PLOS ONE

2011. Artikel. https://doi.org/10.1371/journal.pone.0026374 Open Access

Definitions of Hypnosis and Hypnotizability and their Relation to Suggestion and Suggestibility: A Consensus Statement

Irving Kirsch, Etzel Cardena, Stuart Derbyshire, Zoltan Dienes, Michael Heap, Sakari Kallio, Giuliana Mazzoni, Peter Naish, David Oakley, Catherine Potter, Val Walters, Matthew Whalley

Contemporary Hypnosis & Integrative Therapy

2011. Artikel.

Recurrent Processing in V1/V2 Contributes ot Categorization of Natural Scenes

Mika Koivisto, Henry Railo, Antti Revonsuo, Simo Vanni, Niina Salminen-Vaparanta

Journal of Neuroscience

2011. Artikel. https://doi.org/10.1523/JNEUROSCI.3074-10.2011

Hypnotizability, sleepiness, and subjective experience

Levente Móró, Valdas Noreika, Antti Revonsuo, Kallio Sakari

International journal of clinical and experimental hypnosis

2011. Artikel. https://doi.org/10.1080/00207144.2011.546220

Consciousness lost and found: Subjective experiences in an unresponsive state

Valdas Noreika, Leila Jylhänkangas, Levente Móró, Katja Valli, Kimmo Kaskinoro, Riku Aantaa, Harry Scheinin, Antti Revonsuo

Brain and Cognition

2011. Artikel. https://doi.org/10.1016/j.bandc.2011.09.002

Tracking the processes behind conscious perception: A review of event-related potential correlates of visual consciousness

Henry Railo, Mika Koivisto, Antti Revonsuo

Consciousness and Cognition

2011. Artikel, forskningsöversikt. https://doi.org/10.1016/j.concog.2011.03.019

Dreaming in the multilevel framework

Katja Valli

Consciousness and Cognition

2011. Artikel. https://doi.org/10.1016/j.concog.2011.04.004

Human Embryonic Stem Cell Derived Hepatocyte-Like Cells as a Tool for In Vitro Hazard Assessment of Chemical Carcinogenicity

Reha Yildirimman, Gabriella Brolén, Mireia Vilardell, Gustav Eriksson, Jane Synnergren, Hans Gmuender, Atanas Kamburov, Magnus Ingelman-Sundberg, Jose Castell, Agustin Lahoz, Jos Kleinjans, Joost van Delft, Petter Björquist, Ralf Herwig

Toxicological Sciences

2011. Artikel. https://doi.org/10.1093/toxsci/kfr225 Open Access

Evaluation of combining several statistical methods with a flexible cutoff for identifying differentially expressed genes in pairwise comparison of EST sets

Angelica Lindlöf, Marcus Bräutigam, Aakash Chawade, Olof Olsson, Björn Olsson

Bioinformatics and Biology Insights

2008. Artikel. Open Access

Temporal analysis of oncogenesis using microRNA expression data

Thomas Zichner, Zelmina Lubovac, Björn Olsson

German Conference on Bioinformatics, GCB 2008: Proceedings

2008. Konferensbidrag. Open Access

Putative cold acclimation pathways in Arabidopsis thaliana identified by a combined analysis of mRNA co-expression patterns, promoter motifs and transcription factors

Aakash Chawade, Marcus Bräutigam, Angelica Lindlöf, Olof Olsson, Björn Olsson

BMC Genomics

2007. Artikel. https://doi.org/10.1186/1471-2164-8-304 Open Access

EGOSAP: Evolutionary Gene Ontology based Semantic Alignment of Biological Pathways

Jonas Gamalielsson, Björn Olsson

Proceedings of the 3-rd Moscow Conference on Computational Molecular Biology, Moscow, Russia, July 27-31 2007

2007. Konferensbidrag, muntlig presentation med abstract.

Evolutionary search for improved path diagrams

Kim Laurio, Thomas Svensson, Mats Jirstrand, Patric Nilsson, Jonas Gamalielsson, Björn Olsson

Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics: 5th European Conference, EvoBIO 2007, Valencia, Spain, April 11-13, 2007. Proceedings

2007. Konferensbidrag. https://doi.org/10.1007/978-3-540-71783-6_11

Mapping of the JDL data fusion model to bioinformatics

Jane Synnergren, Jonas Gamalielsson, Olsson Björn

2007 IEEE International Conference on Systems, Man and Cybernetics

2007. Konferensbidrag. https://doi.org/10.1109/ICSMC.2007.4414074

Weighted Clustering Coefficient for Identifying Modular Formations in Protein-Protein Interaction Networks

Zelmina Lubovac, Björn Olsson, Jonas Gamalielsson

Proceedings of World Academy of Science, Engineering and Technology, Vol 14

2006. Konferensbidrag.

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